Bioconductor - Using R / Bioconductor in AnVIL
Bioconductor popup workshops provide short (less than 1 hour) virtual sessions to highlight specific parts of the Terra / AnVIL ecosystem for R and Bioconductor users.
The sessions are easy for participants to join and follow along, with minimal prerequisite skills or knowledge; it is not necessary to attend all workshops.
Sessions will have short presentations, with abundant opportunity for questions and ‘round table’ discussion about the topic of the workshop or other AnVIL-related activities.
The main goal is to engage and enable the use of AnVIL / Terra by R users. All sessions will be recorded and available after the workshop. Each workshop will include a short one-page summary of key learning objectives.
Tutorials and Videos
For a tutorial based on the workshop with an accompanying tutorial see Using R / Bioconductor in AnVIL.
To Register
Please register to receive connection information for each workshop.
Schedule
All workshops are offered on Mondays at lunchtime, 12:00 - 1:00 US Eastern, starting April 26.
| Date | Topic |
|---|---|
| Using R / Bioconductor in AnVIL (Martin Morgan) [recorded session] |
Other Sessions
| Date | Topic |
|---|---|
| The R / Bioconductor AnVIL package for easy access to buckets, data, and workflows, and fast package installation (Martin Morgan, Nitesh Turaga) | |
| Running a workflow: Bulk RNASeq differential expression from FASTQ files to top table (Martin Morgan, Kayla Interdonato) | |
| Single-cell RNASeq with 'Orchestrating Single Cell Analysis' in R / Bioconductor (Vince Carey) | |
| Using AnVIL for teaching R / Bioconductor (Levi Waldron) | |
| Reproducible research with AnVILPublish (Martin Morgan) | |
| Managing costs with AnVILBilling (Vince Carey) | |
| Participant stories (everyone!) |