Running a Workflow: Bulk RNASeq Differential Expression from FASTQ Files to Top Table
Monday, May 10, 2021 12:00 PM to 1:00 PM EDT
The sessions are easy for participants to join and follow along, with minimal prerequisite skills or knowledge; it is not necessary to attend all workshops.
Sessions will have short presentations, with abundant opportunity for questions and ‘round table’ discussion about the topic of the workshop or other AnVIL-related activities.
The main goal is to engage and enable the use of AnVIL / Terra by R users. All sessions will be recorded and available after the workshop. Each workshop will include a short one-page summary of key learning objectives.
Tutorials and Videos
For a tutorial based on the workshop with an accompanying tutorial see Running a Workflow: Bulk RNASeq Differential Expression from FASTQ Files to Top Table.
Please SIGN UP to receive connection information for each workshop.
All workshops are offered on Mondays at lunchtime, 12:00 - 1:00 US Eastern, starting April 26.
|May 10||Running a workflow: Bulk RNASeq differential expression from FASTQ files to top table (Martin Morgan, Kayla Interdonato)|
|April 26||Using R / Bioconductor in AnVIL (Martin Morgan) [recorded session]|
|May 3||The R / Bioconductor AnVIL package for easy access to buckets, data, and workflows, and fast package installation (Martin Morgan, Nitesh Turaga)|
|May 17||Single-cell RNASeq with 'Orchestrating Single Cell Analysis' in R / Bioconductor (Vince Carey)|
|May 24||Using AnVIL for teaching R / Bioconductor (Levi Waldron)|
|May 31||Reproducible research with AnVILPublish (Martin Morgan)|
|June 7||Managing costs with AnVILBilling (Vince Carey)|
|June 14||Participant stories (everyone!)|