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CSERClinical Sequencing Evidence-Generating ResearchActive August, 2020 to July, 2023

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Publications

2023

Conducting clinical genomics research during the COVID-19 pandemic: Lessons learned from the CSER consortium experience

Kraft SA, Russell H, Bensen JT, Bonini KE, Robinson JO, Sahin-Hodoglugil N, Renna K, Hindorff LA, Kaufman D, Horowitz CR, Waltz M, Zepp JM, Knight SJ. (2023). Am J Med Genet A. https://doi.org/10.1002/ajmg.a.63033. PMID: 36341765.

Detection of mosaic variants using genome sequencing in a large pediatric cohort

Odgis JA, Gallagher KM, Rehman AU, Marathe PN, Bonini KE, Sebastin M, Di Biase M, Brown K, Kelly NR, Ramos MA, Thomas-Wilson A, Guha S, Okur V, Ganapathi M, Elkhoury L, Edelmann L, Zinberg RE, Abul-Husn NS, Diaz GA, Greally JM, Suckiel SA, Jobanputra V, Horowitz CR, Kenny EE, Wasserstein MP, Gelb BD. (2023). Am J Med Genet A. https://doi.org/10.1002/ajmg.a.63062. PMID: 36563179.

Lessons learned while starting multi-institutional genetics research in diverse populations: A report from the Clinical Sequencing Evidence-Generating Research (CSER) consortium

Russell H, Smith HS, Bensen JT, Murali P, Ferket BS, Finnila C, Hindorff LA, Sahin-Hodoglugil N. (2023). Contemp Clin Trials. https://doi.org/10.1016/j.cct.2022.107063. PMID: 36567057.

The PrU: Development and validation of a measure to assess personal utility of genomic results

Turbitt E, Kohler JN, Angelo F, Miller IM, Lewis KL, Goddard KAB, Wilfond BS, Biesecker BB, Leo MC. (2023). Genet Med. https://doi.org/10.1016/j.gim.2022.12.003. PMID: 36516964.

Laboratory-related outcomes from integrating an accessible delivery model for hereditary cancer risk assessment and genetic testing in populations with barriers to access

Amendola LM, Shuster E, Leo MC, Dorschner MO, Rolf BA, Shirts BH, Gilmore MJ, Okuyama S, Zepp JM, Kauffman TL, Mittendorf KF, Bellcross C, Jenkins CL, Joseph G, Riddle L, Syngal S, Ukaegbu C, Goddard KAB, Wilfond BS, Jarvik GP; CHARM Study. (2022). Genet Med. https://doi.org/10.1016/j.gim.2022.02.006. PMID: 35305866.

Prevalence and prediction of medical distrust in a diverse medical genomic research sample

Angelo F, Veenstra D, Knerr S, Devine B. (2022). Genet Med. https://doi.org/10.1016/j.gim.2022.03.007. PMID: 35384843.

Genome sequencing as a first-line diagnostic test for hospitalized infants

Bowling KM, Thompson ML, Finnila CR, Hiatt SM, Latner DR, Amaral MD, Lawlor JMJ, East KM, Cochran ME, Greve V, Kelley WV, Gray DE, Felker SA, Meddaugh H, Cannon A, Luedecke A, Jackson KE, Hendon LG, Janani HM, Johnston M, Merin LA, Deans SL, Tuura C, Williams H, Laborde K, Neu MB, Patrick-Esteve J, Hurst ACE, Kandasamy J, Carlo W, Brothers KB, Kirmse BM, Savich R, Superneau D, Spedale SB, Knight SJ, Barsh GS, Korf BR, Cooper GM. (2022). Genet Med. https://doi.org/10.1016/j.gim.2021.11.020. PMID: 34930662.

Return of non-ACMG recommended incidental genetic findings to pediatric patients: considerations and opportunities from experiences in genomic sequencing

Bowling KM, Thompson ML, Kelly MA, Scollon S, Slavotinek AM, Powell BC, Kirmse BM, Hendon LG, Brothers KB, Korf BR, Cooper GM, Greally JM, Hurst ACE. (2022). Genome Med. https://doi.org/10.1186/s13073-022-01139-2. PMID: 36414972.

"Let's Just Wait Until She's Born": Temporal Factors That Shape Decision-Making for Prenatal Genomic Sequencing Amongst Families Underrepresented in Genomic Research

Brown JEH, Zamora AN, Outram S, Sparks TN, Lianoglou BR, Norstad M, Sahin Hodoglugil NN, Norton ME, Ackerman SL. (2022). Front Genet. https://doi.org/10.3389/fgene.2022.882703. PMID: 35669190.

A Validation Framework for Somatic Copy Number Detection in Targeted Sequencing Panels

Chandramohan R, Reuther J, Gandhi I, Voicu H, Alvarez KR, Plon SE, Lopez-Terrada DH, Fisher KE, Parsons DW, Roy A. (2022). J Mol Diagn. https://doi.org/10.1016/j.jmoldx.2022.03.011. PMID: 35487348.

Identifying patients with Lynch syndrome using a universal tumor screening program in an integrated healthcare system

Crain PR, Zepp JM, Gille S, Jenkins L, Kauffman TL, Shuster E, Goddard KAB, Wilfond BS, Hunter JE. (2022). Hered Cancer Clin Pract. https://doi.org/10.1186/s13053-022-00217-1. PMID: 35436948.

Multicancer Screening Tests: Anticipating And Addressing Considerations For Payer Coverage And Patient Access

Deverka PA, Douglas MP, Phillips KA. (2022). Health Aff (Millwood). https://doi.org/10.1377/hlthaff.2021.01316. PMID: 35254936.

Analyzing Precision Medicine Utilization with Real-World Data: A Scoping Review

Douglas MP, Kumar A. (2022). J Pers Med. https://doi.org/10.3390/jpm12040557. PMID: 35455673.

Hereditary cancer panel testing challenges and solutions for the latinx community: costs, access, and variants

Douglas MP, Lin GA, Trosman JR, Phillips KA. (2022). J Community Genet. https://doi.org/10.1007/s12687-021-00563-y. PMID: 34743282.

Motivations and concerns of patients considering participation in an implementation study of a hereditary cancer risk assessment program in diverse primary care settings

Duenas DM, Shipman KJ, Porter KM, Shuster E, Guerra C, Reyes A, Kauffman TL, Hunter JE, Goddard KAB, Wilfond BS, Kraft SA. (2022). Genet Med. https://doi.org/10.1016/j.gim.2021.11.017. PMID: 34906471.

Cost-effectiveness frameworks for comparing genome and exome sequencing versus conventional diagnostic pathways: A scoping review and recommended methods

Ferket BS, Baldwin Z, Murali P, Pai A, Mittendorf KF, Russell HV, Chen F, Lynch FL, Lich KH, Hindorff LA, Savich R, Slavotinek A, Smith HS, Gelb BD, Veenstra DL. (2022). Genet Med. https://doi.org/10.1016/j.gim.2022.06.004. PMID: 35833928.

Expanding the phenotype of males with OFD1 pathogenic variants-a case report and literature review

Gangaram B, Devine WP, Slavotinek A. (2022). Eur J Med Genet. https://doi.org/10.1016/j.ejmg.2022.104496. PMID: 35398350.

Distinct somatic DICER1 hotspot mutations in three metachronous ovarian Sertoli-Leydig cell tumors in a patient with DICER1 syndrome

Garcia A, Desrosiers L, Scollon S, Gruner S, Reuther J, Gandhi I, Patil N, Fuller MY, Dai H, Muzny D, Gibbs RA, Bercaw-Pratt JL, Rao SL, Rainusso N, Fisher KE, Lin FY, Plon SE, Parsons DW, Roy A. (2022). Cancer Genet. https://doi.org/10.1016/j.cancergen.2022.01.001. PMID: 35026696.

The role of future-oriented affect in engagement with genomic testing results

Gillman AS, Iles IA, Klein WMP, Biesecker BB, Lewis KL, Biesecker LG, Ferrer RA. (2022). J Behav Med. https://doi.org/10.1007/s10865-021-00253-7. PMID: 34480685.

The ACMG SF v3.0 gene list increases returnable variant detection by 22% when compared with v2.0 in the ClinSeq cohort

Johnston JJ, Brennan ML, Radenbaugh B, Yoo SJ, Hernandez SM; NHGRI Reverse Phenotyping Core; Lewis KL, Katz AE, Manolio TA, Biesecker LG. (2022). Genet Med. https://doi.org/10.1016/j.gim.2021.11.012. PMID: 34906458.

An accessible, relational, inclusive, and actionable (ARIA) model of genetic counseling compared with usual care: Results of a randomized controlled trial

Joseph G, Leo MC, Riddle L, Guerra C, Amendola LM, Gilmore MJ, Rolf BA, Dorschner MO, Zepp J, Biesecker BB, Caruncho M, Hunter JE, Keast E, Lewis HS, Duenas D, Kauffman T, Bulkley JE, Anderson KP, Jarvik GP, Goddard KAB, Wilfond BS; CHARM Study Team. (2022). Genet Med. https://doi.org/10.1016/j.gim.2022.07.025. PMID: 36053287.

Risk-reducing surgery in unaffected individuals receiving cancer genetic testing in an integrated health care system

Knerr S, Guo B, Mittendorf KF, Feigelson HS, Gilmore MJ, Jarvik GP, Kauffman TL, Keast E, Lynch FL, Muessig KR, Okuyama S, Veenstra DL, Zepp JM, Goddard KAB, Devine B. (2022). Cancer. https://doi.org/10.1002/cncr.34349. PMID: 35679147.

Further description of two patients with biallelic variants in NADSYN1 in association with cardiac and vertebral anomalies

Kortbawi H, Ames E, Pritchard A, Devine P, van Ziffle J, Slavotinek A. (2022). Am J Med Genet A. https://doi.org/10.1002/ajmg.a.62765. PMID: 35491967.

Influence of payer coverage and out-of-pocket costs on ordering of NGS panel tests for hereditary cancer in diverse settings

Lin GA, Trosman JR, Douglas MP, Weldon CB, Scheuner MT, Kurian A, Phillips KA. (2022). J Genet Couns. https://doi.org/10.1002/jgc4.1459. PMID: 34231930.

Literacy-adapted, electronic family history assessment for genetics referral in primary care: patient user insights from qualitative interviews

Mittendorf KF, Lewis HS, Duenas DM, Eubanks DJ, Gilmore MJ, Goddard KAB, Joseph G, Kauffman TL, Kraft SA, Lindberg NM, Reyes AA, Shuster E, Syngal S, Ukaegbu C, Zepp JM, Wilfond BS, Porter KM. (2022). Hered Cancer Clin Pract. https://doi.org/10.1186/s13053-022-00231-3. PMID: 35689290.

Adaptation and early implementation of the PREdiction model for gene mutations (PREMM(5)™) for lynch syndrome risk assessment in a diverse population

Mittendorf KF, Ukaegbu C, Gilmore MJ, Lindberg NM, Kauffman TL, Eubanks DJ, Shuster E, Allen J, McMullen C, Feigelson HS, Anderson KP, Leo MC, Hunter JE, Sasaki SO, Zepp JM, Syngal S, Wilfond BS, Goddard KAB. (2022). Fam Cancer. https://doi.org/10.1007/s10689-021-00243-3. PMID: 33754278.

Lessons learned and recommendations for data coordination in collaborative research: The CSER consortium experience

Muenzen KD, Amendola LM, Kauffman TL, Mittendorf KF, Bensen JT, Chen F, Green R, Powell BC, Kvale M, Angelo F, Farnan L, Fullerton SM, Robinson JO, Li T, Murali P, Lawlor JMJ, Ou J, Hindorff LA, Jarvik GP, Crosslin DR. (2022). HGG Adv. https://doi.org/10.1016/j.xhgg.2022.100120. PMID: 35707062.

Retrospective assessment of barriers and access to genetic services for hereditary cancer syndromes in an integrated health care delivery system

Muessig KR, Zepp JM, Keast E, Shuster EE, Reyes AA, Arnold B, Ingphakorn C, Gilmore MJ, Kauffman TL, Hunter JE, Knerr S, Feigelson HS, Goddard KAB. (2022). Hered Cancer Clin Pract. https://doi.org/10.1186/s13053-022-00213-5. PMID: 35144679.

The difficulties of broad data sharing in genomic medicine: Empirical evidence from diverse participants in prenatal and pediatric clinical genomics research

Norstad M, Outram S, Brown JEH, Zamora AN, Koenig BA, Risch N, Norton ME, Slavotinek A, Ackerman SL. (2022). Genet Med. https://doi.org/10.1016/j.gim.2021.09.021. PMID: 34906477.

Integration of stakeholder engagement from development to dissemination in genomic medicine research: Approaches and outcomes from the CSER Consortium

O'Daniel JM, Ackerman S, Desrosiers LR, Rego S, Knight SJ, Mollison L, Byfield G, Anderson KP, Danila MI, Horowitz CR, Joseph G, Lamoure G, Lindberg NM, McMullen CK, Mittendorf KF, Ramos MA, Robinson M, Sillari C, Madden EB; CSER Stakeholder and Engagement Work Group. (2022). Genet Med. https://doi.org/10.1016/j.gim.2022.01.008. PMID: 35227608.

Parental Hopes and Understandings of the Value of Prenatal Diagnostic Genomic Sequencing: A Qualitative Analysis

Outram SM, Brown JEH, Zamora AN, Sahin-Hodoglugil N, Ackerman SL. (2022). Front Genet. https://doi.org/10.3389/fgene.2022.883225. PMID: 35923691.

US private payers' perspectives on insurance coverage for genome sequencing versus exome sequencing: A study by the Clinical Sequencing Evidence-Generating Research Consortium (CSER)

Phillips KA, Trosman JR, Douglas MP, Gelb BD, Ferket BS, Hindorff LA, Slavotinek AM, Berg JS, Russell HV, Devine B, Greve V, Smith HS. (2022). Genet Med. https://doi.org/10.1016/j.gim.2021.08.009. PMID: 34906461.

Perspectives and preferences regarding genomic secondary findings in underrepresented prenatal and pediatric populations: A mixed-methods approach

Rego S, Hoban H, Outram S, Zamora AN, Chen F, Sahin-Hodoglugil N, Anguiano B, Norstad M, Yip T, Lianoglou B, Sparks TN, Norton ME, Koenig BA, Slavotinek AM, Ackerman SL. (2022). Genet Med. https://doi.org/10.1016/j.gim.2022.02.004. PMID: 35396980.

Development and evaluation of an exome sequencing training course for medical interpreters

Riddle L, Karliner LS, Livaudais-Toman J, Guerra C, Roat CE, Rope AF, Wade A, Caruncho M, Zepp JM, Giang J, Wilfond BS, Joseph G. (2022). Per Med. https://doi.org/10.2217/pme-2021-0091. PMID: 35171038.

Barriers to family history knowledge and family communication among LGBTQ+ individuals in the context of hereditary cancer risk assessment

Rolf BA, Schneider JL, Amendola LM, Davis JV, Mittendorf KF, Schmidt MA, Jarvik GP, Wilfond BS, Goddard KAB, Ezzell Hunter J. (2022). J Genet Couns. https://doi.org/10.1002/jgc4.1476. PMID: 34302314.

Clinical and molecular features of pediatric cancer patients with Lynch syndrome

Scollon S, Eldomery MK, Reuther J, Lin FY, Potter SL, Desrosiers L, McClain KL, Smith V, Su JM, Venkatramani R, Hu J, Korchina V, Zarrin-Khameh N, Gibbs RA, Muzny DM, Eng C, Roy A, Parsons DW, Plon SE. (2022). Pediatr Blood Cancer. https://doi.org/10.1002/pbc.29859. PMID: 35713195.

Prenatal presentation of multiple anomalies associated with haploinsufficiency for ARID1A

Slavotinek A, Lefebvre M, Brehin AC, Thauvin C, Patrier S, Sparks TN, Norton M, Yu J, Huang E. (2022). Eur J Med Genet. https://doi.org/10.1016/j.ejmg.2021.104407. PMID: 34942405.

Predicting genes from phenotypes using human phenotype ontology (HPO) terms

Slavotinek A, Prasad H, Yip T, Rego S, Hoban H, Kvale M. (2022). Hum Genet. https://doi.org/10.1007/s00439-022-02449-6. PMID: 35357580.

Perceived Utility of Genomic Sequencing: Qualitative Analysis and Synthesis of a Conceptual Model to Inform Patient-Centered Instrument Development

Smith HS, Morain SR, Robinson JO, Canfield I, Malek J, Rubanovich CK, Bloss CS, Ackerman SL, Biesecker B, Brothers KB, Goytia CN, Horowitz CR, Knight SJ, Koenig B, Kraft SA, Outram S, Rini C, Shipman KJ, Waltz M, Wilfond B, McGuire AL. (2022). Patient. https://doi.org/10.1007/s40271-021-00558-4. PMID: 34658003.

Testing and extending strategies for identifying genetic disease-related encounters in pediatric patients

Spees LP, Hicklin K, Adams MC, Farnan L, Bensen JT, Gilleskie DB, Berg JS, Powell BC, Lich KH. (2022). Genet Med. https://doi.org/10.1016/j.gim.2021.12.001. PMID: 35034852.

Disparities in the acceptance of chromosomal microarray at the time of prenatal genetic diagnosis

Swanson K, Loeliger KB, Chetty SP, Sparks TN, Norton ME. (2022). Prenat Diagn. https://doi.org/10.1002/pd.6109. PMID: 35106791.

The utility of pathologic examination and comprehensive phenotyping for accurate diagnosis with perinatal exome sequencing

Swanson K, Norton ME, Lianoglou BR, Jelin AC, Hodoglugil U, Van Ziffle J, Devine P, Sparks TN. (2022). Prenat Diagn. https://doi.org/10.1002/pd.6197. PMID: 35723972.

Preference for secondary findings in prenatal and pediatric exome sequencing

Swanson K, Sparks TN, Lianoglou BR, Chen F, Downum S, Patel S, Rego S, Yip T, Van Ziffle J, Koenig BA, Slavotinek AM, Norton ME. (2022). Prenat Diagn. https://doi.org/10.1002/pd.5973. PMID: 34057224.

Scaling Genetic Counseling in the Genomics Era

Amendola LM, Golden-Grant K, Scollon S. (2021). Annu Rev Genomics Hum Genet. https://doi.org/10.1146/annurev-genom-110320-121752. PMID: 33722076.

Private payer coverage policies for ApoE-e4 genetic testing

Arias JJ, Tyler AM, Douglas MP, Phillips KA. (2021). Genet Med. https://doi.org/10.1038/s41436-020-01042-4. PMID: 33420342.

DNA-based screening and personal health: a points to consider statement for individuals and health-care providers from the American College of Medical Genetics and Genomics (ACMG)

Bean LJH, Scheuner MT, Murray MF, Biesecker LG, Green RC, Monaghan KG, Palomaki GE, Sharp RR, Trotter TL, Watson MS, Powell CM; ACMG Board of Directors. (2021). Genet Med. https://doi.org/10.1038/s41436-020-01083-9. PMID: 33790423.

A review and definition of 'usual care' in genetic counseling trials to standardize use in research

Biesecker BB, Lillie SE, Amendola LM, Donohue KE, East KM, Foreman AKM, Gilmore MJ, Greve V, Liangolou B, O'Daniel JM, Odgis JA, Rego S, Rolf B, Scollon S, Suckiel SA, Zepp J, Joseph G. (2021). J Genet Couns. https://doi.org/10.1002/jgc4.1363. PMID: 33278053.

Preferences for and acceptability of receiving pharmacogenomic results by mail: A focus group study with a primarily African-American cohort

Chan PA, Lewis KL, Biesecker BB, Erby LH, Fasaye GA, Epps S, Biesecker LG, Turbitt E. (2021). J Genet Couns. https://doi.org/10.1002/jgc4.1424. PMID: 33876469.

The Therapeutic Odyssey: Positioning Genomic Sequencing in the Search for a Child's Best Possible Life

Childerhose JE, Rich C, East KM, Kelley WV, Simmons S, Finnila CR, Bowling K, Amaral M, Hiatt SM, Thompson M, Gray DE, Lawlor JMJ, Myers RM, Barsh GS, Lose EJ, Bebin ME, Cooper GM, Brothers KB. (2021). AJOB Empir Bioeth. https://doi.org/10.1080/23294515.2021.1907475. PMID: 33843487.

Heterozygous ANKRD17 loss-of-function variants cause a syndrome with intellectual disability, speech delay, and dysmorphism

Chopra M, McEntagart M, Clayton-Smith J, Platzer K, Shukla A, Girisha KM, Kaur A, Kaur P, Pfundt R, Veenstra-Knol H, Mancini GMS, Cappuccio G, Brunetti-Pierri N, Kortüm F, Hempel M, Denecke J, Lehman A; CAUSES Study; Kleefstra T, Stuurman KE, Wilke M, Thompson ML, Bebin EM, Bijlsma EK, Hoffer MJV, Peeters-Scholte C, Slavotinek A, Weiss WA, Yip T, Hodoglugil U, Whittle A, diMonda J, Neira J, Yang S, Kirby A, Pinz H, Lechner R, Sleutels F, Helbig I, McKeown S, Helbig K, Willaert R, Juusola J, Semotok J, Hadonou M, Short J; Genomics England Research Consortium; Yachelevich N, Lala S, Fernández-Jaen A, Pelayo JP, Klöckner C, Kamphausen SB, Abou Jamra R, Arelin M, Innes AM, Niskakoski A, Amin S, Williams M, Evans J, Smithson S, Smedley D, de Burca A, Kini U, Delatycki MB, Gallacher L, Yeung A, Pais L, Field M, Martin E, Charles P, Courtin T, Keren B, Iascone M, Cereda A, Poke G, Abadie V, Chalouhi C, Parthasarathy P, Halliday BJ, Robertson SP, Lyonnet S, Amiel J, Gordon CT. (2021). Am J Hum Genet. https://doi.org/10.1016/j.ajhg.2021.04.007. PMID: 33909992.

Increased Burden of Rare Sequence Variants in GnRH-Associated Genes in Women With Hypothalamic Amenorrhea

Delaney A, Burkholder AB, Lavender CA, Plummer L, Mericq V, Merino PM, Quinton R, Lewis KL, Meader BN, Albano A, Shaw ND, Welt CK, Martin KA, Seminara SB, Biesecker LG, Bailey-Wilson JE, Hall JE. (2021). J Clin Endocrinol Metab. https://doi.org/10.1210/clinem/dgaa609. PMID: 32870266.

Hope versus reality: Parent expectations of genomic testing

Donohue KE, Dolan SM, Watnick D, Gallagher KM, Odgis JA, Suckiel SA, Teitelman N, Gelb BD, Kenny EE, Wasserstein MP, Horowitz CR, Bauman LJ. (2021). Patient Educ Couns. https://doi.org/10.1016/j.pec.2021.01.030. PMID: 33640235.

Pitfalls and challenges in genetic test interpretation: An exploration of genetic professionals experience with interpretation of results

Donohue KE, Gooch C, Katz A, Wakelee J, Slavotinek A, Korf BR. (2021). Clin Genet. https://doi.org/10.1111/cge.13917. PMID: 33818754.

Adaptation of the working alliance inventory for the assessment of the therapeutic alliance in genetic counseling

Erby LH, Wisniewski T, Lewis KL, Hernandez C, Biesecker LG, Biesecker BB. (2021). J Genet Couns. https://doi.org/10.1002/jgc4.1378. PMID: 33554391.

A decision aid for additional findings in genomic sequencing: Development and pilot testing

Freed AS, Gruß I, McMullen CK, Leo MC, Kauffman TL, Porter KM, Muessig KR, Eubanks D, Goddard KAB, Wilfond BS, Liles EG. (2021). Patient Educ Couns. https://doi.org/10.1016/j.pec.2020.10.038. PMID: 33191058.

PPA2-associated sudden cardiac death: extending the clinical and allelic spectrum in 20 new families

Guimier A, Achleitner MT, Moreau de Bellaing A, Edwards M, de Pontual L, Mittal K, Dunn KE, Grove ME, Tysoe CJ, Dimartino C, Cameron J, Kanthi A, Shukla A, van den Broek F, Chatterjee D, Alston CL, Knowles CV, Brett L, Till JA, Homfray T, French P, Spentzou G, Elserafy NA, Lichkus KS, Sankaran BP, Kennedy HL, George PM, Kidd A, Wortmann SB, Fisk DG, Koopmann TT, Rafiq MA, Merker JD, Parikh S, Ahimaz P, Weintraub RG, Ma AS, Turner C, Ellaway CJ, Phillips LK, Thorburn DR, Chung WK, Kana SL, Faye-Petersen OM, Thompson ML, Janin A, McLeod K, McGowan R, McFarland R, Girisha KM, Morris-Rosendahl DJ, Hurst ACE, Turner CLS, Hamilton RM, Taylor RW, Bajolle F, Gordon CT, Amiel J, Mayr JA, Doudney K. (2021). Genet Med. https://doi.org/10.1038/s41436-021-01296-6. PMID: 34400813.

Examining access to care in clinical genomic research and medicine: Experiences from the CSER Consortium

Gutierrez AM, Robinson JO, Outram SM, Smith HS, Kraft SA, Donohue KE, Biesecker BB, Brothers KB, Chen F, Hailu B, Hindorff LA, Hoban H, Hsu RL, Knight SJ, Koenig BA, Lewis KL, Lich KH, O'Daniel JM, Okuyama S, Tomlinson GE, Waltz M, Wilfond BS, Ackerman SL, Majumder MA. (2021). J Clin Transl Sci. https://doi.org/10.1017/cts.2021.855. PMID: 34888063.

Long-read genome sequencing for the molecular diagnosis of neurodevelopmental disorders

Hiatt SM, Lawlor JMJ, Handley LH, Ramaker RC, Rogers BB, Partridge EC, Boston LB, Williams M, Plott CB, Jenkins J, Gray DE, Holt JM, Bowling KM, Bebin EM, Grimwood J, Schmutz J, Cooper GM. (2021). HGG Adv. https://doi.org/10.1016/j.xhgg.2021.100023. PMID: 33937879.

Dyadic concordance and associations of beliefs with intentions to learn carrier results from genomic sequencing

Huelsnitz CO, Turbitt E, Taber JM, Lewis KL, Biesecker LG, Biesecker BB, Klein WMP. (2021). J Behav Med. https://doi.org/10.1007/s10865-021-00222-0. PMID: 33987754.

Variant curation expert panel recommendations for RYR1 pathogenicity classifications in malignant hyperthermia susceptibility

Johnston JJ, Dirksen RT, Girard T, Gonsalves SG, Hopkins PM, Riazi S, Saddic LA, Sambuughin N, Saxena R, Stowell K, Weber J, Rosenberg H, Biesecker LG. (2021). Genet Med. https://doi.org/10.1038/s41436-021-01125-w. PMID: 33767344.

Complicated legacies: The human genome at 20

Jones KM, Cook-Deegan R, Rotimi CN, Callier SL, Bentley AR, Stevens H, Phillips KA, Jansen JP, Weyant CF, Roberts DE, Zielinski D, Erlich Y, Garrison NA, Carroll SR, Ossorio PN, Moreau Y, Wang M. (2021). Science. https://doi.org/10.1126/science.abg5266. PMID: 33542123.

De novo variants in SNAP25 cause an early-onset developmental and epileptic encephalopathy

Klöckner C, Sticht H, Zacher P, Popp B, Babcock HE, Bakker DP, Barwick K, Bonfert MV, Bönnemann CG, Brilstra EH; Care4Rare Canada Consortium; Chung WK, Clarke AJ, Devine P, Donkervoort S, Fraser JL, Friedman J, Gates A, Ghoumid J, Hobson E, Horvath G, Keller-Ramey J, Keren B, Kurian MA, Lee V, Leppig KA, Lundgren J, McDonald MT, McLaughlin HM, McTague A, Mefford HC, Mignot C, Mikati MA, Nava C, Raymond FL, Sampson JR, Sanchis-Juan A, Shashi V, Shieh JTC, Shinawi M, Slavotinek A, Stödberg T, Stong N, Sullivan JA, Taylor AC, Toler TL, van den Boogaard MJ, van der Crabben SN, van Gassen KLI, van Jaarsveld RH, Van Ziffle J, Wadley AF, Wagner M, Wigby K, Wortmann SB, Zarate YA, Møller RS, Lemke JR, Platzer K. (2021). Genet Med. https://doi.org/10.1038/s41436-020-01020-w. PMID: 33299146.

Participant Reactions to a Literacy-Focused, Web-Based Informed Consent Approach for a Genomic Implementation Study

Kraft SA, Porter KM, Duenas DM, Guerra C, Joseph G, Lee SS, Shipman KJ, Allen J, Eubanks D, Kauffman TL, Lindberg NM, Anderson K, Zepp JM, Gilmore MJ, Mittendorf KF, Shuster E, Muessig KR, Arnold B, Goddard KAB, Wilfond BS. (2021). AJOB Empir Bioeth. https://doi.org/10.1080/23294515.2020.1823907. PMID: 32981477.

Engagement and return of results preferences among a primarily African American genomic sequencing research cohort

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Creating accessible Spanish language materials for Clinical Sequencing Evidence-Generating Research consortium genomic projects: challenges and lessons learned

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Durable Response to Larotrectinib in a Child With Histologic Diagnosis of Recurrent Disseminated Ependymoma Discovered to Harbor an NTRK2 Fusion: The Impact of Integrated Genomic Profiling

Mangum R, Reuther J, Bertrand KC, Chandramohan R, Kukreja MK, Paulino AC, Muzny D, Hu J, Gibbs RA, Curry DJ, Malbari F, Chintagumpala MM, Adesina AM, Fisher KE, Mack SC, Plon SE, Roy A, Parsons DW, Lin FY. (2021). JCO Precis Oncol. https://doi.org/10.1200/PO.20.00375. PMID: 34651095.

Third case of Bardet-Biedl syndrome caused by a biallelic variant predicted to affect splicing of IFT74

Mardy AH, Hodoglugil U, Yip T, Slavotinek AM. (2021). Clin Genet. https://doi.org/10.1111/cge.13962. PMID: 33748949.

Cancer Health Assessments Reaching Many (CHARM): A clinical trial assessing a multimodal cancer genetics services delivery program and its impact on diverse populations

Mittendorf KF, Kauffman TL, Amendola LM, Anderson KP, Biesecker BB, Dorschner MO, Duenas DM, Eubanks DJ, Feigelson HS, Gilmore MJ, Hunter JE, Joseph G, Kraft SA, Lee SSJ, Leo MC, Liles EG, Lindberg NM, Muessig KR, Okuyama S, Porter KM, Riddle LS, Rolf BA, Rope AF, Zepp JM, Jarvik GP, Wilfond BS, Goddard KAB; CHARM study team. (2021). Contemp Clin Trials. https://doi.org/10.1016/j.cct.2021.106432. PMID: 33984519.

Systemic Barriers to Risk-Reducing Interventions for Hereditary Cancer Syndromes: Implications for Health Care Inequities

Mittendorf KF, Knerr S, Kauffman TL, Lindberg NM, Anderson KP, Feigelson HS, Gilmore MJ, Hunter JE, Joseph G, Kraft SA, Zepp JM, Syngal S, Wilfond BS, Goddard KAB. (2021). JCO Precis Oncol. https://doi.org/10.1200/PO.21.00233. PMID: 34778694.

Fetal hydrops and the Incremental yield of Next-generation sequencing over standard prenatal Diagnostic testing (FIND) study: prospective cohort study and meta-analysis

Mone F, Eberhardt RY, Hurles ME, Mcmullan DJ, Maher ER, Lord J, Chitty LS, Dempsey E, Homfray T, Giordano JL, Wapner RJ, Sun L, Sparks TN, Norton ME, Kilby MD. (2021). Ultrasound Obstet Gynecol. https://doi.org/10.1002/uog.23652. PMID: 33847422.

The NYCKidSeq project: study protocol for a randomized controlled trial incorporating genomics into the clinical care of diverse New York City children

Odgis JA, Gallagher KM, Suckiel SA, Donohue KE, Ramos MA, Kelly NR, Bertier G, Blackburn C, Brown K, Fielding L, Lopez J, Aguiniga KL, Maria E, Rodriguez JE, Sebastin M, Teitelman N, Watnick D, Yelton NM, Abhyankar A, Abul-Husn NS, Baum A, Bauman LJ, Beal JC, Bloom T, Cunningham-Rundles C, Diaz GA, Dolan S, Ferket BS, Jobanputra V, Kovatch P, McDonald TV, McGoldrick PE, Rhodes R, Rinke ML, Robinson M, Rubinstein A, Shulman LH, Stolte C, Wolf SM, Yozawitz E, Zinberg RE, Greally JM, Gelb BD, Horowitz CR, Wasserstein MP, Kenny EE. (2021). Trials. https://doi.org/10.1186/s13063-020-04953-4. PMID: 33446240.

GenomeDiver: a platform for phenotype-guided medical genomic diagnosis

Pearson NM, Stolte C, Shi K, Beren F, Abul-Husn NS, Bertier G, Brown K, Diaz GA, Odgis JA, Suckiel SA, Horowitz CR, Wasserstein M, Gelb BD, Kenny EE, Gagnon C, Jobanputra V, Bloom T, Greally JM. (2021). Genet Med. https://doi.org/10.1038/s41436-021-01219-5. PMID: 34113009.

Availability and funding of clinical genomic sequencing globally

Phillips KA, Douglas MP, Wordsworth S, Buchanan J, Marshall DA. (2021). BMJ Glob Health. https://doi.org/10.1136/bmjgh-2020-004415. PMID: 33574068.

Development and early implementation of an Accessible, Relational, Inclusive and Actionable approach to genetic counseling: The ARIA model

Riddle L, Amendola LM, Gilmore MJ, Guerra C, Biesecker B, Kauffman TL, Anderson K, Rope AF, Leo MC, Caruncho M, Jarvik GP, Wilfond B, Goddard KAB, Joseph G. (2021). Patient Educ Couns. https://doi.org/10.1016/j.pec.2020.12.017. PMID: 33549385.

Burden or benefit? Effects of providing education about and the option to request additional genomic findings from diagnostic exome sequencing: A randomized controlled trial

Rini C, Roche MI, Lin FC, Foreman AKM, Khan CM, Griesemer I, Waltz M, Lee K, O'Daniel JM, Evans JP, Berg JS, Henderson GE. (2021). Patient Educ Couns. https://doi.org/10.1016/j.pec.2021.04.026. PMID: 33966955.

A systematic literature review of disclosure practices and reported outcomes for medically actionable genomic secondary findings

Sapp JC, Facio FM, Cooper D, Lewis KL, Modlin E, van der Wees P, Biesecker LG. (2021). Genet Med. https://doi.org/10.1038/s41436-021-01295-7. PMID: 34433902.

Laboratory business models and practices: implications for availability and access to germline genetic testing

Scheuner MT, Douglas MP, Sales P, Ackerman SL, Phillips KA. (2021). Genet Med. https://doi.org/10.1038/s41436-021-01184-z. PMID: 33958748.

Expanding the genotypic and phenotypic spectrum in a diverse cohort of 104 individuals with Wiedemann-Steiner syndrome

Sheppard SE, Campbell IM, Harr MH, Gold N, Li D, Bjornsson HT, Cohen JS, Fahrner JA, Fatemi A, Harris JR, Nowak C, Stevens CA, Grand K, Au M, Graham JM Jr, Sanchez-Lara PA, Campo MD, Jones MC, Abdul-Rahman O, Alkuraya FS, Bassetti JA, Bergstrom K, Bhoj E, Dugan S, Kaplan JD, Derar N, Gripp KW, Hauser N, Innes AM, Keena B, Kodra N, Miller R, Nelson B, Nowaczyk MJ, Rahbeeni Z, Ben-Shachar S, Shieh JT, Slavotinek A, Sobering AK, Abbott MA, Allain DC, Amlie-Wolf L, Au PYB, Bedoukian E, Beek G, Barry J, Berg J, Bernstein JA, Cytrynbaum C, Chung BH, Donoghue S, Dorrani N, Eaton A, Flores-Daboub JA, Dubbs H, Felix CA, Fong CT, Fung JLF, Gangaram B, Goldstein A, Greenberg R, Ha TK, Hersh J, Izumi K, Kallish S, Kravets E, Kwok PY, Jobling RK, Knight Johnson AE, Kushner J, Lee BH, Levin B, Lindstrom K, Manickam K, Mardach R, McCormick E, McLeod DR, Mentch FD, Minks K, Muraresku C, Nelson SF, Porazzi P, Pichurin PN, Powell-Hamilton NN, Powis Z, Ritter A, Rogers C, Rohena L, Ronspies C, Schroeder A, Stark Z, Starr L, Stoler J, Suwannarat P, Velinov M, Weksberg R, Wilnai Y, Zadeh N, Zand DJ, Falk MJ, et al. (2021). Am J Med Genet A. https://doi.org/10.1002/ajmg.a.62124. PMID: 33783954.

Conceptualization of utility in translational clinical genomics research

Smith HS, Brothers KB, Knight SJ, Ackerman SL, Rini C, Veenstra DL, McGuire AL, Wilfond BS, Malek J. (2021). Am J Hum Genet. https://doi.org/10.1016/j.ajhg.2021.08.013. PMID: 34687653.

Evaluating the clinical utility of early exome sequencing in diverse pediatric outpatient populations in the North Carolina Clinical Genomic Evaluation of Next-generation Exome Sequencing (NCGENES) 2 study: a randomized controlled trial

Staley BS, Milko LV, Waltz M, Griesemer I, Mollison L, Grant TL, Farnan L, Roche M, Navas A, Lightfoot A, Foreman AKM, O'Daniel JM, O'Neill SC, Lin FC, Roman TS, Brandt A, Powell BC, Rini C, Berg JS, Bensen JT. (2021). Trials. https://doi.org/10.1186/s13063-021-05341-2. PMID: 34127041.

Genomic Sequencing Results Disclosure in Diverse and Medically Underserved Populations: Themes, Challenges, and Strategies from the CSER Consortium

Suckiel SA, O'Daniel JM, Donohue KE, Gallagher KM, Gilmore MJ, Hendon LG, Joseph G, Lianoglou BR, Mathews JM, Norton ME, Odgis JA, Poss AF, Rego S, Scollon S, Yip T, Amendola LM. (2021). J Pers Med. https://doi.org/10.3390/jpm11030202. PMID: 33805616.

GUÍA: a digital platform to facilitate result disclosure in genetic counseling

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New cases that expand the genotypic and phenotypic spectrum of Congenital NAD Deficiency Disorder

Szot JO, Slavotinek A, Chong K, Brandau O, Nezarati M, Cueto-González AM, Patel MS, Devine WP, Rego S, Acyinena AP, Shannon P, Myles-Reid D, Blaser S, Mieghem TV, Yavuz-Kienle H, Skladny H, Miller K, Riera MDT, Martínez SA, Tizzano EF, Dupuis L, James Stavropoulos D, McNiven V, Mendoza-Londono R, Elliott AM; CAUSES Study; Phillips RS, Chapman G, Dunwoodie SL. (2021). Hum Mutat. https://doi.org/10.1002/humu.24211. PMID: 33942433.

Genomic analysis and preclinical xenograft model development identify potential therapeutic targets for MYOD1-mutant soft-tissue sarcoma of childhood

Ting MA, Reuther J, Chandramohan R, Voicu H, Gandhi I, Liu M, Cortes-Santiago N, Foster JH, Hicks J, Nuchtern J, Scollon S, Plon SE, Chintagumpala M, Rainusso N, Roy A, Parsons DW. (2021). J Pathol. https://doi.org/10.1002/path.5736. PMID: 34086347.

Variants in the degron of AFF3 are associated with intellectual disability, mesomelic dysplasia, horseshoe kidney, and epileptic encephalopathy

Voisin N, Schnur RE, Douzgou S, Hiatt SM, Rustad CF, Brown NJ, Earl DL, Keren B, Levchenko O, Geuer S, Verheyen S, Johnson D, Zarate YA, Hančárová M, Amor DJ, Bebin EM, Blatterer J, Brusco A, Cappuccio G, Charrow J, Chatron N, Cooper GM, Courtin T, Dadali E, Delafontaine J, Del Giudice E, Doco M, Douglas G, Eisenkölbl A, Funari T, Giannuzzi G, Gruber-Sedlmayr U, Guex N, Heron D, Holla ØL, Hurst ACE, Juusola J, Kronn D, Lavrov A, Lee C, Lorrain S, Merckoll E, Mikhaleva A, Norman J, Pradervand S, Prchalová D, Rhodes L, Sanders VR, Sedláček Z, Seebacher HA, Sellars EA, Sirchia F, Takenouchi T, Tanaka AJ, Taska-Tench H, Tønne E, Tveten K, Vitiello G, Vlčková M, Uehara T, Nava C, Yalcin B, Kosaki K, Donnai D, Mundlos S, Brunetti-Pierri N, Chung WK, Reymond A. (2021). Am J Hum Genet. https://doi.org/10.1016/j.ajhg.2021.04.001. PMID: 33961779.

Aberrant regulation of a poison exon caused by a non-coding variant in a mouse model of Scn1a-associated epileptic encephalopathy

Voskobiynyk Y, Battu G, Felker SA, Cochran JN, Newton MP, Lambert LJ, Kesterson RA, Myers RM, Cooper GM, Roberson ED, Barsh GS. (2021). PLoS Genet. https://doi.org/10.1371/journal.pgen.1009195. PMID: 33411788.

"Is that something that should concern me?": a qualitative exploration of parent understanding of their child's genomic test results

Watnick D, Odgis JA, Suckiel SA, Gallagher KM, Teitelman N, Donohue KE, Gelb BD, Kenny EE, Wasserstein MP, Horowitz CR, Dolan SM, Bauman LJ. (2021). HGG Adv. https://doi.org/10.1016/j.xhgg.2021.100027. PMID: 33884375.

Variant Classification Concordance using the ACMG-AMP Variant Interpretation Guidelines across Nine Genomic Implementation Research Studies

Amendola LM, Muenzen K, Biesecker LG, Bowling KM, Cooper GM, Dorschner MO, Driscoll C, Foreman AKM, Golden-Grant K, Greally JM, Hindorff L, Kanavy D, Jobanputra V, Johnston JJ, Kenny EE, McNulty S, Murali P, Ou J, Powell BC, Rehm HL, Rolf B, Roman TS, Van Ziffle J, Guha S, Abhyankar A, Crosslin D, Venner E, Yuan B, Zouk H; CSER Sequencing and Diagnostic Yield working group; Jarvik GP. (2020). Am J Hum Genet. https://doi.org/10.1016/j.ajhg.2020.09.011. PMID: 33108757.

The expanding spectrum of NFIB-associated phenotypes in a diverse patient population-A report of two new patients

Barrus K, Rego S, Yip T, Martin PM, Glen OA, Van Ziffle J, Slavotinek AM. (2020). Am J Med Genet A. https://doi.org/10.1002/ajmg.a.61852. PMID: 32902921.

Predictive and Precision Medicine with Genomic Data

Baudhuin LM, Biesecker LG, Burke W, Green ED, Green RC. (2020). Clin Chem. https://doi.org/10.1373/clinchem.2019.304345. PMID: 31843866.

Genomic Screening for Malignant Hyperthermia Susceptibility

Biesecker LG, Dirksen RT, Girard T, Hopkins PM, Riazi S, Rosenberg H, Stowell K, Weber J. (2020). Anesthesiology. https://doi.org/10.1097/ALN.0000000000003547. PMID: 32898259.

Phenotypic spectrum and transcriptomic profile associated with germline variants in TRAF7

Castilla-Vallmanya L, Selmer KK, Dimartino C, Rabionet R, Blanco-Sánchez B, Yang S, Reijnders MRF, van Essen AJ, Oufadem M, Vigeland MD, Stadheim B, Houge G, Cox H, Kingston H, Clayton-Smith J, Innis JW, Iascone M, Cereda A, Gabbiadini S, Chung WK, Sanders V, Charrow J, Bryant E, Millichap J, Vitobello A, Thauvin C, Mau-Them FT, Faivre L, Lesca G, Labalme A, Rougeot C, Chatron N, Sanlaville D, Christensen KM, Kirby A, Lewandowski R, Gannaway R, Aly M, Lehman A, Clarke L, Graul-Neumann L, Zweier C, Lessel D, Lozic B, Aukrust I, Peretz R, Stratton R, Smol T, Dieux-Coëslier A, Meira J, Wohler E, Sobreira N, Beaver EM, Heeley J, Briere LC, High FA, Sweetser DA, Walker MA, Keegan CE, Jayakar P, Shinawi M, Kerstjens-Frederikse WS, Earl DL, Siu VM, Reesor E, Yao T, Hegele RA, Vaske OM, Rego S; Undiagnosed Diseases Network, Care4Rare Canada Consortium; Shapiro KA, Wong B, Gambello MJ, McDonald M, Karlowicz D, Colombo R, Serretti A, Pais L, O'Donnell-Luria A, Wray A, Sadedin S, Chong B, Tan TY, Christodoulou J, White SM, Slavotinek A, Barbouth D, Morel Swols D, Parisot M, Bole-Feysot C, Nitschké P, Pingault V, Munnich A, Cho MT, Cormier-Daire V, Balcells S, Lyonnet S, Grinberg D, Amiel J, Urreizti R, et al. (2020). Genet Med. https://doi.org/10.1038/s41436-020-0792-7. PMID: 32376980.

Optimizing genetics online resources for diverse readers

Chang J, Penon-Portmann M, Shieh JT. (2020). Genet Med. https://doi.org/10.1038/s41436-019-0695-7. PMID: 31767985.

Use of Real-World Evidence in US Payer Coverage Decision-Making for Next-Generation Sequencing-Based Tests: Challenges, Opportunities, and Potential Solutions

Deverka PA, Douglas MP, Phillips KA. (2020). Value Health. https://doi.org/10.1016/j.jval.2020.02.001. PMID: 32389218.

Private Payer and Medicare Coverage for Circulating Tumor DNA Testing: A Historical Analysis of Coverage Policies From 2015 to 2019

Douglas MP, Gray SW, Phillips KA. (2020). J Natl Compr Canc Netw. https://doi.org/10.6004/jnccn.2020.7542. PMID: 32634780.

A second cohort of CHD3 patients expands the molecular mechanisms known to cause Snijders Blok-Campeau syndrome

Drivas TG, Li D, Nair D, Alaimo JT, Alders M, Altmüller J, Barakat TS, Bebin EM, Bertsch NL, Blackburn PR, Blesson A, Bouman AM, Brockmann K, Brunelle P, Burmeister M, Cooper GM, Denecke J, Dieux-Coëslier A, Dubbs H, Ferrer A, Gal D, Bartik LE, Gunderson LB, Hasadsri L, Jain M, Karimov C, Keena B, Klee EW, Kloth K, Lace B, Macchiaiolo M, Marcadier JL, Milunsky JM, Napier MP, Ortiz-Gonzalez XR, Pichurin PN, Pinner J, Powis Z, Prasad C, Radio FC, Rasmussen KJ, Renaud DL, Rush ET, Saunders C, Selcen D, Seman AR, Shinde DN, Smith ED, Smol T, Snijders Blok L, Stoler JM, Tang S, Tartaglia M, Thompson ML, van de Kamp JM, Wang J, Weise D, Weiss K, Woitschach R, Wollnik B, Yan H, Zackai EH, Zampino G, Campeau P, Bhoj E. (2020). Eur J Hum Genet. https://doi.org/10.1038/s41431-020-0654-4. PMID: 32483341.

Engaging community stakeholders in research on best practices for clinical genomic sequencing

Griesemer I, Staley BS, Lightfoot AF, Bain L, Byrd D, Conway C, Grant TL, Leach B, Milko L, Mollison L, Porter N, Reid S, Smith G, Waltz M, Berg JS, Rini C, O'Daniel JM. (2020). Per Med. https://doi.org/10.2217/pme-2020-0074. PMID: 33026293.

Genetic testing and results disclosure in diverse populations: what does it take?

Horowitz CR. (2020). Genet Med. https://doi.org/10.1038/s41436-020-0874-6. PMID: 32565545.

Management of Secondary Genomic Findings

Katz AE, Nussbaum RL, Solomon BD, Rehm HL, Williams MS, Biesecker LG. (2020). Am J Hum Genet. https://doi.org/10.1016/j.ajhg.2020.05.002. PMID: 32619490.

Integrating stakeholder feedback in translational genomics research: an ethnographic analysis of a study protocol's evolution

Kraft SA, McMullen C, Lindberg NM, Bui D, Shipman K, Anderson K, Joseph G, Duenas DM, Porter KM, Kauffman TL, Koomas A, Ransom CL, Jackson P, Goddard KAB, Wilfond BS, Lee SS. (2020). Genet Med. https://doi.org/10.1038/s41436-020-0763-z. PMID: 32089547.

Demonstrating 'respect for persons' in clinical research: findings from qualitative interviews with diverse genomics research participants

Kraft SA, Rothwell E, Shah SK, Duenas DM, Lewis H, Muessig K, Opel DJ, Goddard KAB, Wilfond BS. (2020). J Med Ethics. https://doi.org/10.1136/medethics-2020-106440. PMID: 33023975.

Acute Statin Administration Reduces Levels of Steroid Hormone Precursors

London E, Tatsi C, Soldin SJ, Wassif CA, Backlund P, Ng D, Biesecker LG, Stratakis CA. (2020). Horm Metab Res. https://doi.org/10.1055/a-1099-9556. PMID: 32040961.

MN1 C-terminal truncation syndrome is a novel neurodevelopmental and craniofacial disorder with partial rhombencephalosynapsis

Mak CCY, Doherty D, Lin AE, Vegas N, Cho MT, Viot G, Dimartino C, Weisfeld-Adams JD, Lessel D, Joss S, Li C, Gonzaga-Jauregui C, Zarate YA, Ehmke N, Horn D, Troyer C, Kant SG, Lee Y, Ishak GE, Leung G, Barone Pritchard A, Yang S, Bend EG, Filippini F, Roadhouse C, Lebrun N, Mehaffey MG, Martin PM, Apple B, Millan F, Puk O, Hoffer MJV, Henderson LB, McGowan R, Wentzensen IM, Pei S, Zahir FR, Yu M, Gibson WT, Seman A, Steeves M, Murrell JR, Luettgen S, Francisco E, Strom TM, Amlie-Wolf L, Kaindl AM, Wilson WG, Halbach S, Basel-Salmon L, Lev-El N, Denecke J, Vissers LELM, Radtke K, Chelly J, Zackai E, Friedman JM, Bamshad MJ, Nickerson DA; University of Washington Center for Mendelian Genomics; Reid RR, Devriendt K, Chae JH, Stolerman E, McDougall C, Powis Z, Bienvenu T, Tan TY, Orenstein N, Dobyns WB, Shieh JT, Choi M, Waggoner D, Gripp KW, Parker MJ, Stoler J, Lyonnet S, Cormier-Daire V, Viskochil D, Hoffman TL, Amiel J, Chung BHY, Gordon CT. (2020). Brain. https://doi.org/10.1093/brain/awz379. PMID: 31834374.

Discordant Patient and Clinician Perspectives on the Potential Value of Genetic Services in Safety-Net Clinics

McMullen C, Holup J, Davis JV, Foley P, Jacob L, Cottrell E, Bui DP, Wilfond B, Goddard KA. (2020). J Health Care Poor Underserved. https://doi.org/10.1353/hpu.2020.0099. PMID: 33416699.

A novel truncating variant in ring finger protein 113A (RNF113A) confirms the association of this gene with X-linked trichothiodystrophy

Mendelsohn BA, Beleford DT, Abu-El-Haija A, Alsaleh NS, Rahbeeni Z, Martin PM, Rego S, Huang A, Capodanno G, Shieh JT, Van Ziffle J, Risch N, Alkuraya FS, Slavotinek AM. (2020). Am J Med Genet A. https://doi.org/10.1002/ajmg.a.61450. PMID: 31880405.

De novo TBR1 variants cause a neurocognitive phenotype with ID and autistic traits: report of 25 new individuals and review of the literature

Nambot S, Faivre L, Mirzaa G, Thevenon J, Bruel AL, Mosca-Boidron AL, Masurel-Paulet A, Goldenberg A, Le Meur N, Charollais A, Mignot C, Petit F, Rossi M, Metreau J, Layet V, Amram D, Boute-Bénéjean O, Bhoj E, Cousin MA, Kruisselbrink TM, Lanpher BC, Klee EW, Fiala E, Grange DK, Meschino WS, Hiatt SM, Cooper GM, Olivié H, Smith WE, Dumas M, Lehman A; CAUSES Study; Inglese C, Nizon M, Guerrini R, Vetro A, Kaplan ES, Miramar D, Van Gils J, Fergelot P, Bodamer O, Herkert JC, Pajusalu S, Õunap K, Filiano JJ, Smol T, Piton A, Gérard B, Chantot-Bastaraud S, Bienvenu T, Li D, Juusola J, Devriendt K, Bilan F, Poé C, Chevarin M, Jouan T, Tisserant E, Rivière JB, Tran Mau-Them F, Philippe C, Duffourd Y, Dobyns WB, Hevner R, Thauvin-Robinet C. (2020). Eur J Hum Genet. https://doi.org/10.1038/s41431-020-0571-6. PMID: 32005960.

Expanding Use of Clinical Genome Sequencing and the Need for More Data on Implementation

Phillips KA, Douglas MP, Marshall DA. (2020). JAMA. https://doi.org/10.1001/jama.2020.19933. PMID: 33104159.

Clinical Genetics Lacks Standard Definitions and Protocols for the Collection and Use of Diversity Measures

Popejoy AB, Crooks KR, Fullerton SM, Hindorff LA, Hooker GW, Koenig BA, Pino N, Ramos EM, Ritter DI, Wand H, Wright MW, Yudell M, Zou JY, Plon SE, Bustamante CD, Ormond KE; Clinical Genome Resource (ClinGen) Ancestry and Diversity Working Group. (2020). Am J Hum Genet. https://doi.org/10.1016/j.ajhg.2020.05.005. PMID: 32504544.

Roles of attitudes and injunctive norms in decisional conflict and disclosure following receipt of genome sequencing results

Reid AE, Ferrer RA, Kadirvel S, Biesecker BB, Lewis KL, Biesecker LG, Klein WMP. (2020). Soc Sci Med. https://doi.org/10.1016/j.socscimed.2020.113147. PMID: 32624263.

Genomic knowledge in the context of diagnostic exome sequencing: changes over time, persistent subgroup differences, and associations with psychological sequencing outcomes

Rini C, Henderson GE, Evans JP, Berg JS, Foreman AKM, Griesemer I, Waltz M, O'Daniel JM, Roche MI. (2020). Genet Med. https://doi.org/10.1038/s41436-019-0600-4. PMID: 31312045.

Exome Sequencing for Prenatal Diagnosis in Nonimmune Hydrops Fetalis

Sparks TN, Lianoglou BR, Adami RR, Pluym ID, Holliman K, Duffy J, Downum SL, Patel S, Faubel A, Boe NM, Field NT, Murphy A, Laurent LC, Jolley J, Uy C, Slavotinek AM, Devine P, Hodoglugil U, Van Ziffle J, Sanders SJ, MacKenzie TC, Norton ME; University of California Fetal–Maternal Consortium; University of California, San Francisco Center for Maternal–Fetal Precision Medicine. (2020). N Engl J Med. https://doi.org/10.1056/NEJMoa2023643. PMID: 33027564.

Fitting a naturally scaled point system to the ACMG/AMP variant classification guidelines

Tavtigian SV, Harrison SM, Boucher KM, Biesecker LG. (2020). Hum Mutat. https://doi.org/10.1002/humu.24088. PMID: 32720330.

Defining the phenotype of FHF1 developmental and epileptic encephalopathy

Trivisano M, Ferretti A, Bebin E, Huh L, Lesca G, Siekierska A, Takeguchi R, Carneiro M, De Palma L, Guella I, Haginoya K, Shi RM, Kikuchi A, Kobayashi T, Jung J, Lagae L, Milh M, Mathieu ML, Minassian BA, Novelli A, Pietrafusa N, Takeshita E, Tartaglia M, Terracciano A, Thompson ML, Cooper GM, Vigevano F, Villard L, Villeneuve N, Buyse GM, Demos M, Scheffer IE, Specchio N. (2020). Epilepsia. https://doi.org/10.1111/epi.16582. PMID: 32645220.

Insights From a Temporal Assessment of Increases in US Private Payer Coverage of Tumor Sequencing From 2015 to 2019

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Perspectives of US private payers on insurance coverage for pediatric and prenatal exome sequencing: Results of a study from the Program in Prenatal and Pediatric Genomic Sequencing (P3EGS)

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Perceptions of uncertainties about carrier results identified by exome sequencing in a randomized controlled trial

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Referencing BRCA in hereditary cancer risk discussions: In search of an anchor in a sea of uncertainty

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Personalized Medicine and the Power of Electronic Health Records

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Insurance coverage does not predict outcomes of genetic testing: The search for meaning in payer decisions for germline cancer tests

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Genomic screening and genomic diagnostic testing-two very different kettles of fish

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Secondary findings in exome slices, virtual panels, and anticipatory sequencing

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Recommendations for application of the functional evidence PS3/BS3 criterion using the ACMG/AMP sequence variant interpretation framework

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Returning negative results to individuals in a genomic screening program: lessons learned

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ZMIZ1 Variants Cause a Syndromic Neurodevelopmental Disorder

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Participant Engagement in Translational Genomics Research: Respect for Persons-and Then Some

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Developmental and epileptic encephalopathy in two siblings with a novel, homozygous missense variant in SCN1B

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Child Neurology: Spastic paraparesis and dystonia with a novel ADCY5 mutation

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Private payer coverage policies for exome sequencing (ES) in pediatric patients: trends over time and analysis of evidence cited

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Rethinking the "open future" argument against predictive genetic testing of children

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Psychological adaptation to diagnostic genomic sequencing results: The role of hope fulfillment

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Agents of empathy: How medical interpreters bridge sociocultural gaps in genomic sequencing disclosures with Spanish-speaking families

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Overview of Specifications to the ACMG/AMP Variant Interpretation Guidelines

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Secondary findings from clinical genomic sequencing: prevalence, patient perspectives, family history assessment, and health-care costs from a multisite study

Hart MR, Biesecker BB, Blout CL, Christensen KD, Amendola LM, Bergstrom KL, Biswas S, Bowling KM, Brothers KB, Conlin LK, Cooper GM, Dulik MC, East KM, Everett JN, Finnila CR, Ghazani AA, Gilmore MJ, Goddard KAB, Jarvik GP, Johnston JJ, Kauffman TL, Kelley WV, Krier JB, Lewis KL, McGuire AL, McMullen C, Ou J, Plon SE, Rehm HL, Richards CS, Romasko EJ, Miren Sagardia A, Spinner NB, Thompson ML, Turbitt E, Vassy JL, Wilfond BS, Veenstra DL, Berg JS, Green RC, Biesecker LG, Hindorff LA. (2019). Genet Med. https://doi.org/10.1038/s41436-018-0308-x. PMID: 30287922.

Correction: Secondary findings from clinical genomic sequencing: prevalence, patient perspectives, family history assessment, and health-care costs from a multisite study

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Deleterious Variation in BRSK2 Associates with a Neurodevelopmental Disorder

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The Genomic Medicine Integrative Research Framework: A Conceptual Framework for Conducting Genomic Medicine Research

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Successful recruitment and retention of diverse participants in a genomics clinical trial: a good invitation to a great party

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The evolving landscape of expanded carrier screening: challenges and opportunities

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Pathogenic WDFY3 variants cause neurodevelopmental disorders and opposing effects on brain size

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Knowledge, motivations, expectations, and traits of an African, African-American, and Afro-Caribbean sequencing cohort and comparisons to the original ClinSeq(®) cohort

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Responsibility, culpability, and parental views on genomic testing for seriously ill children

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Health behaviors among unaffected participants following receipt of variants of uncertain significance in cardiomyopathy-associated genes

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Third-Party Genetic Interpretation Tools: A Mixed-Methods Study of Consumer Motivation and Behavior

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Clinical utility of genomic sequencing

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Clinical exome sequencing vs. usual care for hereditary colorectal cancer diagnosis: A pilot comparative effectiveness study

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Correction: Variants in MED12L, encoding a subunit of the Mediator kinase module, are responsible for intellectual disability associated with transcriptional defect

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Can precision medicine help achieve the goal of reducing care when the risks exceed the benefits?

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Emergence of Hybrid Models of Genetic Testing Beyond Direct-to-Consumer or Traditional Labs

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The refractory epilepsy screening tool for Lennox-Gastaut syndrome (REST-LGS)

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A YWHAZ Variant Associated With Cardiofaciocutaneous Syndrome Activates the RAF-ERK Pathway

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Psychological outcomes related to exome and genome sequencing result disclosure: a meta-analysis of seven Clinical Sequencing Exploratory Research (CSER) Consortium studies

Robinson JO, Wynn J, Biesecker B, Biesecker LG, Bernhardt B, Brothers KB, Chung WK, Christensen KD, Green RC, McGuire AL, Hart MR, Griesemer I, Patrick DL, Rini C, Veenstra D, Cronin AM, Gray SW. (2019). Genet Med. https://doi.org/10.1038/s41436-019-0565-3. PMID: 31189963.

Factors influencing NCGENES research participants' requests for non-medically actionable secondary findings

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Exome sequencing disclosures in pediatric cancer care: Patterns of communication among oncologists, genetic counselors, and parents

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Emerging RAS superfamily conditions involving GTPase function

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Variants in TCF20 in neurodevelopmental disability: description of 27 new patients and review of literature

Torti E, Keren B, Palmer EE, Zhu Z, Afenjar A, Anderson IJ, Andrews MV, Atkinson C, Au M, Berry SA, Bowling KM, Boyle J, Buratti J, Cathey SS, Charles P, Cogne B, Courtin T, Escobar LF, Finley SL, Graham JM Jr, Grange DK, Heron D, Hewson S, Hiatt SM, Hibbs KA, Jayakar P, Kalsner L, Larcher L, Lesca G, Mark PR, Miller K, Nava C, Nizon M, Pai GS, Pappas J, Parsons G, Payne K, Putoux A, Rabin R, Sabatier I, Shinawi M, Shur N, Skinner SA, Valence S, Warren H, Whalen S, Crunk A, Douglas G, Monaghan KG, Person RE, Willaert R, Solomon BD, Juusola J. (2019). Genet Med. https://doi.org/10.1038/s41436-019-0454-9. PMID: 30739909.

Ethnic identity and engagement with genome sequencing research

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Consent for clinical genome sequencing: considerations from the Clinical Sequencing Exploratory Research Consortium

Yu JH, Appelbaum PS, Brothers KB, Joffe S, Kauffman TL, Koenig BA, Prince AE, Scollon S, Wolf SM, Bernhardt BA, Wilfond BS; Clinical Sequencing Exploratory Research (CSER) Consortium Informed Consent and Governance Working Group. (2019). Per Med. https://doi.org/10.2217/pme-2018-0076. PMID: 31313633.

Qualitative study of system-level factors related to genomic implementation

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Understanding variations in secondary findings reporting practices across U.S. genome sequencing laboratories

Ackerman SL, Koenig BA. (2018). AJOB Empir Bioeth. https://doi.org/10.1080/23294515.2017.1405095. PMID: 29131714.

The Clinical Sequencing Evidence-Generating Research Consortium: Integrating Genomic Sequencing in Diverse and Medically Underserved Populations

Amendola LM, Berg JS, Horowitz CR, Angelo F, Bensen JT, Biesecker BB, Biesecker LG, Cooper GM, East K, Filipski K, Fullerton SM, Gelb BD, Goddard KAB, Hailu B, Hart R, Hassmiller-Lich K, Joseph G, Kenny EE, Koenig BA, Knight S, Kwok PY, Lewis KL, McGuire AL, Norton ME, Ou J, Parsons DW, Powell BC, Risch N, Robinson M, Rini C, Scollon S, Slavotinek AM, Veenstra DL, Wasserstein MP, Wilfond BS, Hindorff LA; CSER consortium; Plon SE, Jarvik GP. (2018). Am J Hum Genet. https://doi.org/10.1016/j.ajhg.2018.08.007. PMID: 30193136.

Why Patients Decline Genomic Sequencing Studies: Experiences from the CSER Consortium

Amendola LM, Robinson JO, Hart R, Biswas S, Lee K, Bernhardt BA, East K, Gilmore MJ, Kauffman TL, Lewis KL, Roche M, Scollon S, Wynn J, Blout C. (2018). J Genet Couns. https://doi.org/10.1007/s10897-018-0243-7. PMID: 29497922.

Web Platform vs In-Person Genetic Counselor for Return of Carrier Results From Exome Sequencing: A Randomized Clinical Trial

Biesecker BB, Lewis KL, Umstead KL, Johnston JJ, Turbitt E, Fishler KP, Patton JH, Miller IM, Heidlebaugh AR, Biesecker LG. (2018). JAMA Intern Med. https://doi.org/10.1001/jamainternmed.2017.8049. PMID: 29356820.

The ACMG/AMP reputable source criteria for the interpretation of sequence variants

Biesecker LG, Harrison SM; ClinGen Sequence Variant Interpretation Working Group. (2018). Genet Med. https://doi.org/10.1038/gim.2018.42. PMID: 29543229.

Professional responsibilities regarding the provision, publication, and dissemination of patient phenotypes in the context of clinical genetic and genomic testing: points to consider-a statement of the American College of Medical Genetics and Genomics (ACMG)

Bush LW, Beck AE, Biesecker LG, Evans JP, Hamosh A, Holm IA, Martin CL, Richards CS, Rehm HL. (2018). Genet Med. https://doi.org/10.1038/gim.2017.242. PMID: 29323668.

Aberrant Inclusion of a Poison Exon Causes Dravet Syndrome and Related SCN1A-Associated Genetic Epilepsies

Carvill GL, Engel KL, Ramamurthy A, Cochran JN, Roovers J, Stamberger H, Lim N, Schneider AL, Hollingsworth G, Holder DH, Regan BM, Lawlor J, Lagae L, Ceulemans B, Bebin EM, Nguyen J; EuroEPINOMICS Rare Epilepsy Syndrome, Myoclonic-Astatic Epilepsy, and Dravet Working Group; Barsh GS, Weckhuysen S, Meisler M, Berkovic SF, De Jonghe P, Scheffer IE, Myers RM, Cooper GM, Mefford HC. (2018). Am J Hum Genet. https://doi.org/10.1016/j.ajhg.2018.10.023. PMID: 30526861.

Truncating Variants in NAA15 Are Associated with Variable Levels of Intellectual Disability, Autism Spectrum Disorder, and Congenital Anomalies

Cheng H, Dharmadhikari AV, Varland S, Ma N, Domingo D, Kleyner R, Rope AF, Yoon M, Stray-Pedersen A, Posey JE, Crews SR, Eldomery MK, Akdemir ZC, Lewis AM, Sutton VR, Rosenfeld JA, Conboy E, Agre K, Xia F, Walkiewicz M, Longoni M, High FA, van Slegtenhorst MA, Mancini GMS, Finnila CR, van Haeringen A, den Hollander N, Ruivenkamp C, Naidu S, Mahida S, Palmer EE, Murray L, Lim D, Jayakar P, Parker MJ, Giusto S, Stracuzzi E, Romano C, Beighley JS, Bernier RA, Küry S, Nizon M, Corbett MA, Shaw M, Gardner A, Barnett C, Armstrong R, Kassahn KS, Van Dijck A, Vandeweyer G, Kleefstra T, Schieving J, Jongmans MJ, de Vries BBA, Pfundt R, Kerr B, Rojas SK, Boycott KM, Person R, Willaert R, Eichler EE, Kooy RF, Yang Y, Wu JC, Lupski JR, Arnesen T, Cooper GM, Chung WK, Gecz J, Stessman HAF, Meng L, Lyon GJ. (2018). Am J Hum Genet. https://doi.org/10.1016/j.ajhg.2018.03.004. PMID: 29656860.

Anticipated responses of early adopter genetic specialists and nongenetic specialists to unsolicited genomic secondary findings

Christensen KD, Bernhardt BA, Jarvik GP, Hindorff LA, Ou J, Biswas S, Powell BC, Grundmeier RW, Machini K, Karavite DJ, Pennington JW, Krantz ID, Berg JS, Goddard KAB. (2018). Genet Med. https://doi.org/10.1038/gim.2017.243. PMID: 29388940.

Assessment of willingness to pay for expanded carrier screening among women and couples undergoing preconception carrier screening

Clarke EV, Schneider JL, Lynch F, Kauffman TL, Leo MC, Rosales AG, Dickerson JF, Shuster E, Wilfond BS, Goddard KAB. (2018). PLoS One. https://doi.org/10.1371/journal.pone.0200139. PMID: 30020962.

Impact of HIPAA's minimum necessary standard on genomic data sharing

Evans BJ, Jarvik GP. (2018). Genet Med. https://doi.org/10.1038/gim.2017.141. PMID: 28914268.

Precision Medicine: From Science To Value

Ginsburg GS, Phillips KA. (2018). Health Aff (Millwood). https://doi.org/10.1377/hlthaff.2017.1624. PMID: 29733705.

Diagnostic utility of exome sequencing in the evaluation of neuromuscular disorders

Haskell GT, Adams MC, Fan Z, Amin K, Guzman Badillo RJ, Zhou L, Bizon C, Chahin N, Greenwood RS, Milko LV, Shiloh-Malawsky Y, Crooks KR, Strande N, Tennison M, Tilley CR, Brandt A, Wilhelmsen KC, Weck K, Evans JP, Berg JS. (2018). Neurol Genet. https://doi.org/10.1212/NXG.0000000000000212. PMID: 29417091.

Ability of Patients to Distinguish Among Cardiac Genomic Variant Subclassifications

Hellwig LD, Biesecker BB, Lewis KL, Biesecker LG, James CA, Klein WMP. (2018). Circ Genom Precis Med. https://doi.org/10.1161/CIRCGEN.117.001975. PMID: 29848613.

Systematic reanalysis of genomic data improves quality of variant interpretation

Hiatt SM, Amaral MD, Bowling KM, Finnila CR, Thompson ML, Gray DE, Lawlor JMJ, Cochran JN, Bebin EM, Brothers KB, East KM, Kelley WV, Lamb NE, Levy SE, Lose EJ, Neu MB, Rich CA, Simmons S, Myers RM, Barsh GS, Cooper GM. (2018). Clin Genet. https://doi.org/10.1111/cge.13259. PMID: 29652076.

De novo mutations in the GTP/GDP-binding region of RALA, a RAS-like small GTPase, cause intellectual disability and developmental delay

Hiatt SM, Neu MB, Ramaker RC, Hardigan AA, Prokop JW, Hancarova M, Prchalova D, Havlovicova M, Prchal J, Stranecky V, Yim DKC, Powis Z, Keren B, Nava C, Mignot C, Rio M, Revah-Politi A, Hemati P, Stong N, Iglesias AD, Suchy SF, Willaert R, Wentzensen IM, Wheeler PG, Brick L, Kozenko M, Hurst ACE, Wheless JW, Lacassie Y, Myers RM, Barsh GS, Sedlacek Z, Cooper GM. (2018). PLoS Genet. https://doi.org/10.1371/journal.pgen.1007671. PMID: 30500825.

Sequencing Newborns: A Call for Nuanced Use of Genomic Technologies

Johnston J, Lantos JD, Goldenberg A, Chen F, Parens E, Koenig BA; members of the NSIGHT Ethics and Policy Advisory Board. (2018). Hastings Cent Rep. https://doi.org/10.1002/hast.874. PMID: 30133723.

Patient perspectives on the use of categories of conditions for decision making about genomic carrier screening results

Kraft SA, McMullen CK, Porter KM, Kauffman TL, Davis JV, Schneider JL, Goddard KAB, Wilfond BS. (2018). Am J Med Genet A. https://doi.org/10.1002/ajmg.a.38583. PMID: 29250907.

Patient actions and reactions after receiving negative results from expanded carrier screening

Kraft SA, Schneider JL, Leo MC, Kauffman TL, Davis JV, Porter KM, McMullen CK, Wilfond BS, Goddard KAB. (2018). Clin Genet. https://doi.org/10.1111/cge.13206. PMID: 29293279.

Disclosure of cardiac variants of uncertain significance results in an exome cohort

Lawal TA, Lewis KL, Johnston JJ, Heidlebaugh AR, Ng D, Gaston-Johansson FG, Klein WMP, Biesecker BB, Biesecker LG. (2018). Clin Genet. https://doi.org/10.1111/cge.13220. PMID: 29383714.

Outcomes of Counseling after Education about Carrier Results: A Randomized Controlled Trial

Lewis KL, Umstead KL, Johnston JJ, Miller IM, Thompson LJ, Fishler KP, Biesecker LG, Biesecker BB. (2018). Am J Hum Genet. https://doi.org/10.1016/j.ajhg.2018.02.009. PMID: 29526281.

Time Costs for Genetic Counseling in Preconception Carrier Screening with Genome Sequencing

Lynch FL, Himes P, Gilmore MJ, Morris EM, Schneider JL, Kauffman TL, Shuster E, Reiss JA, Dickerson JF, Leo MC, Davis JV, McMullen CK, Wilfond BS, Goddard KAB. (2018). J Genet Couns. https://doi.org/10.1007/s10897-017-0205-5. PMID: 29423569.

A common haplotype containing functional CACNA1H variants is frequently coinherited with increased TPSAB1 copy number

Lyons JJ, Stotz SC, Chovanec J, Liu Y, Lewis KL, Nelson C, DiMaggio T, Jones N, Stone KD, Sung H, Biesecker LG, Colicos MA, Milner JD. (2018). Genet Med. https://doi.org/10.1038/gim.2017.136. PMID: 28933792.

NBEA: Developmental disease gene with early generalized epilepsy phenotypes

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Genetic Test Availability And Spending: Where Are We Now? Where Are We Going?

Phillips KA, Deverka PA, Hooker GW, Douglas MP. (2018). Health Aff (Millwood). https://doi.org/10.1377/hlthaff.2017.1427. PMID: 29733704.

Insurance coverage for genomic tests

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New Medicare Coverage Policy for Next-Generation Tumor Sequencing: A Key Shift in Coverage Criteria With Broad Implications Beyond Medicare

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Evolving Payer Coverage Policies on Genomic Sequencing Tests: Beginning of the End or End of the Beginning?

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Approaches to carrier testing and results disclosure in translational genomics research: The clinical sequencing exploratory research consortium experience

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Preconception Carrier Screening by Genome Sequencing: Results from the Clinical Laboratory

Punj S, Akkari Y, Huang J, Yang F, Creason A, Pak C, Potter A, Dorschner MO, Nickerson DA, Robertson PD, Jarvik GP, Amendola LM, Schleit J, Simpson DK, Rope AF, Reiss J, Kauffman T, Gilmore MJ, Himes P, Wilfond B, Goddard KAB, Richards CS. (2018). Am J Hum Genet. https://doi.org/10.1016/j.ajhg.2018.04.004. PMID: 29754767.

Associations of perceived norms with intentions to learn genomic sequencing results: Roles for attitudes and ambivalence

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The who, what, and why of research participants' intentions to request a broad range of secondary findings in a diagnostic genomic sequencing study

Rini C, Khan CM, Moore E, Roche MI, Evans JP, Berg JS, Powell BC, Corbie-Smith G, Foreman AKM, Griesemer I, Lee K, O'Daniel JM, Henderson GE. (2018). Genet Med. https://doi.org/10.1038/gim.2017.176. PMID: 29261173.

A case for expanding carrier testing to include actionable X-linked disorders

Rope AF, Kauffman TL, Himes P, Amendola LM, Punj S, Akkari Y, Potter A, Davis JV, Schneider JL, Reiss JA, Gilmore MJ, McMullen CK, Nickerson DA, Richards CS, Jarvik GP, Wilfond BS, Goddard KAB. (2018). Clin Case Rep. https://doi.org/10.1002/ccr3.1806. PMID: 30455898.

Characterizing reduced coverage regions through comparison of exome and genome sequencing data across 10 centers

Sanghvi RV, Buhay CJ, Powell BC, Tsai EA, Dorschner MO, Hong CS, Lebo MS, Sasson A, Hanna DS, McGee S, Bowling KM, Cooper GM, Gray DE, Lonigro RJ, Dunford A, Brennan CA, Cibulskis C, Walker K, Carneiro MO, Sailsbery J, Hindorff LA, Robinson DR, Santani A, Sarmady M, Rehm HL, Biesecker LG, Nickerson DA, Hutter CM, Garraway L, Muzny DM, Wagle N; NHGRI Clinical Sequencing Exploratory Research (CSER) Consortium. (2018). Genet Med. https://doi.org/10.1038/gim.2017.192. PMID: 29144510.

"Possibly positive or certainly uncertain?": participants' responses to uncertain diagnostic results from exome sequencing

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De novo mutations in MED13, a component of the Mediator complex, are associated with a novel neurodevelopmental disorder

Snijders Blok L, Hiatt SM, Bowling KM, Prokop JW, Engel KL, Cochran JN, Bebin EM, Bijlsma EK, Ruivenkamp CAL, Terhal P, Simon MEH, Smith R, Hurst JA; DDD study; McLaughlin H, Person R, Crunk A, Wangler MF, Streff H, Symonds JD, Zuberi SM, Elliott KS, Sanders VR, Masunga A, Hopkin RJ, Dubbs HA, Ortiz-Gonzalez XR, Pfundt R, Brunner HG, Fisher SE, Kleefstra T, Cooper GM. (2018). Hum Genet. https://doi.org/10.1007/s00439-018-1887-y. PMID: 29740699.

Reactions to clinical reinterpretation of a gene variant by participants in a sequencing study

Taber JM, Klein WMP, Lewis KL, Johnston JJ, Biesecker LG, Biesecker BB. (2018). Genet Med. https://doi.org/10.1038/gim.2017.88. PMID: 28771245.

Modeling the ACMG/AMP variant classification guidelines as a Bayesian classification framework

Tavtigian SV, Greenblatt MS, Harrison SM, Nussbaum RL, Prabhu SA, Boucher KM, Biesecker LG; ClinGen Sequence Variant Interpretation Working Group (ClinGen SVI). (2018). Genet Med. https://doi.org/10.1038/gim.2017.210. PMID: 29300386.

Genomic sequencing identifies secondary findings in a cohort of parent study participants

Thompson ML, Finnila CR, Bowling KM, Brothers KB, Neu MB, Amaral MD, Hiatt SM, East KM, Gray DE, Lawlor JMJ, Kelley WV, Lose EJ, Rich CA, Simmons S, Levy SE, Myers RM, Barsh GS, Bebin EM, Cooper GM. (2018). Genet Med. https://doi.org/10.1038/gim.2018.53. PMID: 29790872.

Mutations in MAST1 Cause Mega-Corpus-Callosum Syndrome with Cerebellar Hypoplasia and Cortical Malformations

Tripathy R, Leca I, van Dijk T, Weiss J, van Bon BW, Sergaki MC, Gstrein T, Breuss M, Tian G, Bahi-Buisson N, Paciorkowski AR, Pagnamenta AT, Wenninger-Weinzierl A, Martinez-Reza MF, Landler L, Lise S, Taylor JC, Terrone G, Vitiello G, Del Giudice E, Brunetti-Pierri N, D'Amico A, Reymond A, Voisin N, Bernstein JA, Farrelly E, Kini U, Leonard TA, Valence S, Burglen L, Armstrong L, Hiatt SM, Cooper GM, Aldinger KA, Dobyns WB, Mirzaa G, Pierson TM, Baas F, Chelly J, Cowan NJ, Keays DA. (2018). Neuron. https://doi.org/10.1016/j.neuron.2018.10.044. PMID: 30449657.

From the Past to the Present: Insurer Coverage Frameworks for Next-Generation Tumor Sequencing

Trosman JR, Weldon CB, Gradishar WJ, Benson AB 3rd, Cristofanilli M, Kurian AW, Ford JM, Balch A, Watkins J, Phillips KA. (2018). Value Health. https://doi.org/10.1016/j.jval.2018.06.011. PMID: 30224110.

Intentions to share exome sequencing results with family members: exploring spousal beliefs and attitudes

Turbitt E, Roberts MC, Ferrer RA, Taber JM, Lewis KL, Biesecker LG, Biesecker BB, Klein WM. (2018). Eur J Hum Genet. https://doi.org/10.1038/s41431-018-0118-2. PMID: 29476166.

Patient preferences for massively parallel sequencing genetic testing of colorectal cancer risk: a discrete choice experiment

Weymann D, Veenstra DL, Jarvik GP, Regier DA. (2018). Eur J Hum Genet. https://doi.org/10.1038/s41431-018-0161-z. PMID: 29802320.

Lessons Learned From A Study Of Genomics-Based Carrier Screening For Reproductive Decision Making

Wilfond BS, Kauffman TL, Jarvik GP, Reiss JA, Richards CS, McMullen C, Gilmore M, Himes P, Kraft SA, Porter KM, Schneider JL, Punj S, Leo MC, Dickerson JF, Lynch FL, Clarke E, Rope AF, Lutz K, Goddard KAB. (2018). Health Aff (Millwood). https://doi.org/10.1377/hlthaff.2017.1578. PMID: 29733724.

Navigating the research-clinical interface in genomic medicine: analysis from the CSER Consortium

Wolf SM, Amendola LM, Berg JS, Chung WK, Clayton EW, Green RC, Harris-Wai J, Henderson GE, Jarvik GP, Koenig BA, Lehmann LS, McGuire AL, O'Rourke P, Somkin C, Wilfond BS, Burke W. (2018). Genet Med. https://doi.org/10.1038/gim.2017.137. PMID: 28858330.

Pragmatic Tools for Sharing Genomic Research Results with the Relatives of Living and Deceased Research Participants

Wolf SM, Scholtes E, Koenig BA, Petersen GM, Berry SA, Beskow LM, Daly MB, Fernandez CV, Green RC, LeRoy BS, Lindor NM, O'Rourke PP, Breitkopf CR, Rothstein MA, Van Ness B, Wilfond BS. (2018). J Law Med Ethics. https://doi.org/10.1177/1073110518766024. PMID: 30008546.

Clinical providers' experiences with returning results from genomic sequencing: an interview study

Wynn J, Lewis K, Amendola LM, Bernhardt BA, Biswas S, Joshi M, McMullen C, Scollon S. (2018). BMC Med Genomics. https://doi.org/10.1186/s12920-018-0360-z. PMID: 29739461.

Exploring the importance of case-level clinical information for variant interpretation

Berg JS. (2017). Genet Med. https://doi.org/10.1038/gim.2016.106. PMID: 27561084.

PUGS: A novel scale to assess perceptions of uncertainties in genome sequencing

Biesecker BB, Woolford SW, Klein WMP, Brothers KB, Umstead KL, Lewis KL, Biesecker LG, Han PKJ. (2017). Clin Genet. https://doi.org/10.1111/cge.12949. PMID: 27925165.

MYT1L mutations cause intellectual disability and variable obesity by dysregulating gene expression and development of the neuroendocrine hypothalamus

Blanchet P, Bebin M, Bruet S, Cooper GM, Thompson ML, Duban-Bedu B, Gerard B, Piton A, Suckno S, Deshpande C, Clowes V, Vogt J, Turnpenny P, Williamson MP, Alembik Y; Clinical Sequencing Exploratory Research Study Consortium; Deciphering Developmental Disorders Consortium; Glasgow E, McNeill A. (2017). PLoS Genet. https://doi.org/10.1371/journal.pgen.1006957. PMID: 28859103.

Genomic diagnosis for children with intellectual disability and/or developmental delay

Bowling KM, Thompson ML, Amaral MD, Finnila CR, Hiatt SM, Engel KL, Cochran JN, Brothers KB, East KM, Gray DE, Kelley WV, Lamb NE, Lose EJ, Rich CA, Simmons S, Whittle JS, Weaver BT, Nesmith AS, Myers RM, Barsh GS, Bebin EM, Cooper GM. (2017). Genome Med. https://doi.org/10.1186/s13073-017-0433-1. PMID: 28554332.

Eliciting preferences on secondary findings: the Preferences Instrument for Genomic Secondary Results

Brothers KB, East KM, Kelley WV, Wright MF, Westbrook MJ, Rich CA, Bowling KM, Lose EJ, Bebin EM, Simmons S, Myers JA, Barsh G, Myers RM, Cooper GM, Pulley JM, Rothstein MA, Clayton EW. (2017). Genet Med. https://doi.org/10.1038/gim.2016.110. PMID: 27561086.

Online Education and e-Consent for GeneScreen, a Preventive Genomic Screening Study

Cadigan RJ, Butterfield R, Rini C, Waltz M, Kuczynski KJ, Muessig K, Goddard KAB, Henderson GE. (2017). Public Health Genomics. https://doi.org/10.1159/000481359. PMID: 29069655.

Distributive justice, diversity, and inclusion in precision medicine: what will success look like?

Cohn EG, Henderson GE, Appelbaum PS. (2017). Genet Med. https://doi.org/10.1038/gim.2016.92. PMID: 27490116.

Returning Results in Biobank Research: Global Trends and Solutions

De Clercq E, Kaye J, Wolf SM, Koenig BA, Elger BS. (2017). Genet Test Mol Biomarkers. https://doi.org/10.1089/gtmb.2016.0394. PMID: 28146646.

Finding the Rare Pathogenic Variants in a Human Genome

Evans JP, Powell BC, Berg JS. (2017). JAMA. https://doi.org/10.1001/jama.2017.0432. PMID: 28492888.

Reasons for Declining Preconception Expanded Carrier Screening Using Genome Sequencing

Gilmore MJ, Schneider J, Davis JV, Kauffman TL, Leo MC, Bergen K, Reiss JA, Himes P, Morris E, Young C, McMullen C, Wilfond BS, Goddard KAB. (2017). J Genet Couns. https://doi.org/10.1007/s10897-017-0074-y. PMID: 28315134.

Discordance in selected designee for return of genomic findings in the event of participant death and estate executor

Goodman JL, Amendola LM, Horike-Pyne M, Trinidad SB, Fullerton SM, Burke W, Jarvik GP. (2017). Mol Genet Genomic Med. https://doi.org/10.1002/mgg3.274. PMID: 28361104.

CORRIGENDUM: ACMG recommendations for reporting of incidental findings in clinical exome and genome sequencing

Green RC, Berg JS, Grody WW, Kalia SS, Korf BR, Martin CL, McGuire AL, Nussbaum RL, O'Daniel JM, Ormond KE, Rehm HL, Watson MS, Williams MS, Biesecker LG. (2017). Genet Med. https://doi.org/10.1038/gim.2017.18. PMID: 28492529.

Disclosing genetic risk of Alzheimer's disease to cognitively impaired patients and visit companions: Findings from the REVEAL Study

Guan Y, Roter DL, Erby LH, Wolff JL, Gitlin LN, Roberts JS, Green RC, Christensen KD. (2017). Patient Educ Couns. https://doi.org/10.1016/j.pec.2016.12.005. PMID: 28012682.

Portero versus portador: Spanish interpretation of genomic terminology during whole exome sequencing results disclosure

Gutierrez AM, Robinson JO, Statham EE, Scollon S, Bergstrom KL, Slashinski MJ, Parsons DW, Plon SE, McGuire AL, Street RL. (2017). Per Med. https://doi.org/10.2217/pme-2017-0040. PMID: 29749861.

High Rate of Recurrent De Novo Mutations in Developmental and Epileptic Encephalopathies

Hamdan FF, Myers CT, Cossette P, Lemay P, Spiegelman D, Laporte AD, Nassif C, Diallo O, Monlong J, Cadieux-Dion M, Dobrzeniecka S, Meloche C, Retterer K, Cho MT, Rosenfeld JA, Bi W, Massicotte C, Miguet M, Brunga L, Regan BM, Mo K, Tam C, Schneider A, Hollingsworth G; Deciphering Developmental Disorders Study; FitzPatrick DR, Donaldson A, Canham N, Blair E, Kerr B, Fry AE, Thomas RH, Shelagh J, Hurst JA, Brittain H, Blyth M, Lebel RR, Gerkes EH, Davis-Keppen L, Stein Q, Chung WK, Dorison SJ, Benke PJ, Fassi E, Corsten-Janssen N, Kamsteeg EJ, Mau-Them FT, Bruel AL, Verloes A, Õunap K, Wojcik MH, Albert DVF, Venkateswaran S, Ware T, Jones D, Liu YC, Mohammad SS, Bizargity P, Bacino CA, Leuzzi V, Martinelli S, Dallapiccola B, Tartaglia M, Blumkin L, Wierenga KJ, Purcarin G, O'Byrne JJ, Stockler S, Lehman A, Keren B, Nougues MC, Mignot C, Auvin S, Nava C, Hiatt SM, Bebin M, Shao Y, Scaglia F, Lalani SR, Frye RE, Jarjour IT, Jacques S, Boucher RM, Riou E, Srour M, Carmant L, Lortie A, Major P, Diadori P, Dubeau F, D'Anjou G, Bourque G, Berkovic SF, Sadleir LG, Campeau PM, Kibar Z, Lafrenière RG, Girard SL, Mercimek-Mahmutoglu S, Boelman C, et al. (2017). Am J Hum Genet. https://doi.org/10.1016/j.ajhg.2017.09.008. PMID: 29100083.

A taxonomy of medical uncertainties in clinical genome sequencing

Han PKJ, Umstead KL, Bernhardt BA, Green RC, Joffe S, Koenig B, Krantz I, Waterston LB, Biesecker LG, Biesecker BB. (2017). Genet Med. https://doi.org/10.1038/gim.2016.212. PMID: 28102863.

Mutations in EBF3 Disturb Transcriptional Profiles and Cause Intellectual Disability, Ataxia, and Facial Dysmorphism

Harms FL, Girisha KM, Hardigan AA, Kortüm F, Shukla A, Alawi M, Dalal A, Brady L, Tarnopolsky M, Bird LM, Ceulemans S, Bebin M, Bowling KM, Hiatt SM, Lose EJ, Primiano M, Chung WK, Juusola J, Akdemir ZC, Bainbridge M, Charng WL, Drummond-Borg M, Eldomery MK, El-Hattab AW, Saleh MAM, Bézieau S, Cogné B, Isidor B, Küry S, Lupski JR, Myers RM, Cooper GM, Kutsche K. (2017). Am J Hum Genet. https://doi.org/10.1016/j.ajhg.2016.11.012. PMID: 28017373.

Whole Exome Sequencing Identifies Truncating Variants in Nuclear Envelope Genes in Patients With Cardiovascular Disease

Haskell GT, Jensen BC, Samsa LA, Marchuk D, Huang W, Skrzynia C, Tilley C, Seifert BA, Rivera-Muñoz EA, Koller B, Wilhelmsen KC, Liu J, Alhosaini H, Weck KE, Evans JP, Berg JS. (2017). Circ Cardiovasc Genet. https://doi.org/10.1161/CIRCGENETICS.116.001443. PMID: 28611029.

Genetic Complexity of Mitral Valve Prolapse Revealed by Clinical and Genetic Evaluation of a Large Family

Haskell GT, Jensen BC, Skrzynia C, Pulikkotil T, Tilley CR, Lu Y, Marchuk DS, Ann Samsa L, Wilhelmsen KC, Lange E, Patterson C, Evans JP, Berg JS. (2017). J Heart Valve Dis. https://doi.org/. PMID: 29762926.

Genome sequencing and carrier testing: decisions on categorization and whether to disclose results of carrier testing

Himes P, Kauffman TL, Muessig KR, Amendola LM, Berg JS, Dorschner MO, Gilmore M, Nickerson DA, Reiss JA, Richards CS, Rope AF, Simpson DK, Wilfond BS, Jarvik GP, Goddard KAB. (2017). Genet Med. https://doi.org/10.1038/gim.2016.198. PMID: 28079899.

Engagement and communication among participants in the ClinSeq Genomic Sequencing Study

Hooker GW, Umstead KL, Lewis KL, Koehly LK, Biesecker LG, Biesecker BB. (2017). Genet Med. https://doi.org/10.1038/gim.2016.71. PMID: 27763633.

Mastering genomic terminology

Jarvik GP, Evans JP. (2017). Genet Med. https://doi.org/10.1038/gim.2016.139. PMID: 27657676.

The NextGen Study: patient motivation for participation in genome sequencing for carrier status

Kauffman TL, Irving SA, Leo MC, Gilmore MJ, Himes P, McMullen CK, Morris E, Schneider J, Wilfond BS, Goddard KAB. (2017). Mol Genet Genomic Med. https://doi.org/10.1002/mgg3.306. PMID: 28944234.

Design of a randomized controlled trial for genomic carrier screening in healthy patients seeking preconception genetic testing

Kauffman TL, Wilfond BS, Jarvik GP, Leo MC, Lynch FL, Reiss JA, Richards CS, McMullen C, Nickerson D, Dorschner MO, Goddard KA. (2017). Contemp Clin Trials. https://doi.org/10.1016/j.cct.2016.12.007. PMID: 27940182.

Defining personal utility in genomics: A Delphi study

Kohler JN, Turbitt E, Lewis KL, Wilfond BS, Jamal L, Peay HL, Biesecker LG, Biesecker BB. (2017). Clin Genet. https://doi.org/10.1111/cge.12998. PMID: 28218387.

Bedside Back to Bench: Building Bridges between Basic and Clinical Genomic Research

Manolio TA, Fowler DM, Starita LM, Haendel MA, MacArthur DG, Biesecker LG, Worthey E, Chisholm RL, Green ED, Jacob HJ, McLeod HL, Roden D, Rodriguez LL, Williams MS, Cooper GM, Cox NJ, Herman GE, Kingsmore S, Lo C, Lutz C, MacRae CA, Nussbaum RL, Ordovas JM, Ramos EM, Robinson PN, Rubinstein WS, Seidman C, Stranger BE, Wang H, Westerfield M, Bult C. (2017). Cell. https://doi.org/10.1016/j.cell.2017.03.005. PMID: 28340351.

Precision medicine in pediatric oncology: Lessons learned and next steps

Mody RJ, Prensner JR, Everett J, Parsons DW, Chinnaiyan AM. (2017). Pediatr Blood Cancer. https://doi.org/10.1002/pbc.26288. PMID: 27748023.

Examining the Cascade of Participant Attrition in a Genomic Medicine Research Study: Barriers and Facilitators to Achieving Diversity

Moore EG, Roche M, Rini C, Corty EW, Girnary Z, O'Daniel JM, Lin FC, Corbie-Smith G, Evans JP, Henderson GE, Berg JS. (2017). Public Health Genomics. https://doi.org/10.1159/000490519. PMID: 30086550.

Assessing the capability of massively parallel sequencing for opportunistic pharmacogenetic screening

Ng D, Hong CS, Singh LN, Johnston JJ, Mullikin JC, Biesecker LG. (2017). Genet Med. https://doi.org/10.1038/gim.2016.105. PMID: 27537706.

A survey of current practices for genomic sequencing test interpretation and reporting processes in US laboratories

O'Daniel JM, McLaughlin HM, Amendola LM, Bale SJ, Berg JS, Bick D, Bowling KM, Chao EC, Chung WK, Conlin LK, Cooper GM, Das S, Deignan JL, Dorschner MO, Evans JP, Ghazani AA, Goddard KA, Gornick M, Farwell Hagman KD, Hambuch T, Hegde M, Hindorff LA, Holm IA, Jarvik GP, Knight Johnson A, Mighion L, Morra M, Plon SE, Punj S, Richards CS, Santani A, Shirts BH, Spinner NB, Tang S, Weck KE, Wolf SM, Yang Y, Rehm HL. (2017). Genet Med. https://doi.org/10.1038/gim.2016.152. PMID: 27811861.

ClinGen Pathogenicity Calculator: a configurable system for assessing pathogenicity of genetic variants

Patel RY, Shah N, Jackson AR, Ghosh R, Pawliczek P, Paithankar S, Baker A, Riehle K, Chen H, Milosavljevic S, Bizon C, Rynearson S, Nelson T, Jarvik GP, Rehm HL, Harrison SM, Azzariti D, Powell B, Babb L, Plon SE, Milosavljevic A; ClinGen Resource. (2017). Genome Med. https://doi.org/10.1186/s13073-016-0391-z. PMID: 28081714.

Resolution of Disease Phenotypes Resulting from Multilocus Genomic Variation

Posey JE, Harel T, Liu P, Rosenfeld JA, James RA, Coban Akdemir ZH, Walkiewicz M, Bi W, Xiao R, Ding Y, Xia F, Beaudet AL, Muzny DM, Gibbs RA, Boerwinkle E, Eng CM, Sutton VR, Shaw CA, Plon SE, Yang Y, Lupski JR. (2017). N Engl J Med. https://doi.org/10.1056/NEJMoa1516767. PMID: 27959697.

Is "incidental finding" the best term?: a study of patients' preferences

Tan N, Amendola LM, O'Daniel JM, Burt A, Horike-Pyne MJ, Boshe L, Henderson GE, Rini C, Roche MI, Hisama FM, Burke W, Wilfond B, Jarvik GP. (2017). Genet Med. https://doi.org/10.1038/gim.2016.96. PMID: 27490114.

Prenatal exome sequencing in anomalous fetuses: new opportunities and challenges

Vora NL, Powell B, Brandt A, Strande N, Hardisty E, Gilmore K, Foreman AKM, Wilhelmsen K, Bizon C, Reilly J, Owen P, Powell CM, Skinner D, Rini C, Lyerly AD, Boggess KA, Weck K, Berg JS, Evans JP. (2017). Genet Med. https://doi.org/10.1038/gim.2017.33. PMID: 28518170.

Research Participants' Preferences for Hypothetical Secondary Results from Genomic Research

Wynn J, Martinez J, Duong J, Chiuzan C, Phelan JC, Fyer A, Klitzman RL, Appelbaum PS, Chung WK. (2017). J Genet Couns. https://doi.org/10.1007/s10897-016-0059-2. PMID: 28035592.

When "Actionable" Genomic Sequencing Results Cannot Be Acted Upon

Zikmund-Fisher BJ. (2017). JAMA Oncol. https://doi.org/10.1001/jamaoncol.2016.3283. PMID: 27657856.

Sequencing-based diagnostics for pediatric genetic diseases: progress and potential

Abou Tayoun AN, Krock B, Spinner NB. (2016). Expert Rev Mol Diagn. https://doi.org/10.1080/14737159.2016.1209411. PMID: 27388938.

Performance of ACMG-AMP Variant-Interpretation Guidelines among Nine Laboratories in the Clinical Sequencing Exploratory Research Consortium

Amendola LM, Jarvik GP, Leo MC, McLaughlin HM, Akkari Y, Amaral MD, Berg JS, Biswas S, Bowling KM, Conlin LK, Cooper GM, Dorschner MO, Dulik MC, Ghazani AA, Ghosh R, Green RC, Hart R, Horton C, Johnston JJ, Lebo MS, Milosavljevic A, Ou J, Pak CM, Patel RY, Punj S, Richards CS, Salama J, Strande NT, Yang Y, Plon SE, Biesecker LG, Rehm HL. (2016). Am J Hum Genet. https://doi.org/10.1016/j.ajhg.2016.06.001. PMID: 27392081.

Performance of ACMG-AMP Variant-Interpretation Guidelines among Nine Laboratories in the Clinical Sequencing Exploratory Research Consortium

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Information Technology Support for Clinical Genetic Testing within an Academic Medical Center

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Adopting genetics: motivations and outcomes of personal genomic testing in adult adoptees

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Applications of Genomic Sequencing in Pediatric CNS Tumors

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Systematic Evaluation of Sanger Validation of Next-Generation Sequencing Variants

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A semiquantitative metric for evaluating clinical actionability of incidental or secondary findings from genome-scale sequencing

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Long QT Syndrome and Potentially Pathogenic Genetic Variants

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Overcalling secondary findings

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Recommendations for the integration of genomics into clinical practice

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When Participants in Genomic Research Grow Up: Contact and Consent at the Age of Majority

Brothers KB, Holm IA, Childerhose JE, Antommaria AHM, Bernhardt BA, Clayton EW, Gelb BD, Joffe S, Lynch JA, McCormick JB, McCullough LB, Parsons DW, Sundaresan AS, Wolf WA, Yu JH, Wilfond BS; Pediatrics Workgroup of the Clinical Sequencing Exploratory Research (CSER) Consortium. (2016). J Pediatr. https://doi.org/10.1016/j.jpeds.2015.09.020. PMID: 26477867.

Expectation versus Reality: The Impact of Utility on Emotional Outcomes after Returning Individualized Genetic Research Results in Pediatric Rare Disease Research, a Qualitative Interview Study

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Consumers report lower confidence in their genetics knowledge following direct-to-consumer personal genomic testing

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Disclosing Pleiotropic Effects During Genetic Risk Assessment for Alzheimer Disease: A Randomized Trial

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Are physicians prepared for whole genome sequencing? a qualitative analysis

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Initiation of universal tumor screening for Lynch syndrome in colorectal cancer patients as a model for the implementation of genetic information into clinical oncology practice

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Family health history reporting is sensitive to small changes in wording

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Toward clinical genomics in everyday medicine: perspectives and recommendations

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Incorporating genetic counseling into clinical care for children and adolescents with cancer

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No Panacea: Next-Gen Sequencing Will Not Mitigate Adoptees' Lack of Genetic Family Health History

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Next Generation Sequencing in the Clinic: a Patterns of Care Study in a Retrospective Cohort of Subjects Referred to a Genetic Medicine Clinic for Suspected Lynch Syndrome

Gallego CJ, Perez ML, Burt A, Amendola LM, Shirts BH, Pritchard CC, Hisama FM, Bennett RL, Veenstra DL, Jarvik GP. (2016). J Genet Couns. https://doi.org/10.1007/s10897-015-9902-0. PMID: 26637299.

The impact of tumor profiling approaches and genomic data strategies for cancer precision medicine

Garofalo A, Sholl L, Reardon B, Taylor-Weiner A, Amin-Mansour A, Miao D, Liu D, Oliver N, MacConaill L, Ducar M, Rojas-Rudilla V, Giannakis M, Ghazani A, Gray S, Janne P, Garber J, Joffe S, Lindeman N, Wagle N, Garraway LA, Van Allen EM. (2016). Genome Med. https://doi.org/10.1186/s13073-016-0333-9. PMID: 27460824.

Family Studies for Classification of Variants of Uncertain Classification: Current Laboratory Clinical Practice and a New Web-Based Educational Tool

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Oncologists' and cancer patients' views on whole-exome sequencing and incidental findings: results from the CanSeq study

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Clinical Sequencing Exploratory Research Consortium: Accelerating Evidence-Based Practice of Genomic Medicine

Green RC, Goddard KA, Jarvik GP, Amendola LM, Appelbaum PS, Berg JS, Bernhardt BA, Biesecker LG, Biswas S, Blout CL, Bowling KM, Brothers KB, Burke W, Caga-Anan CF, Chinnaiyan AM, Chung WK, Clayton EW, Cooper GM, East K, Evans JP, Fullerton SM, Garraway LA, Garrett JR, Gray SW, Henderson GE, Hindorff LA, Holm IA, Lewis MH, Hutter CM, Janne PA, Joffe S, Kaufman D, Knoppers BM, Koenig BA, Krantz ID, Manolio TA, McCullough L, McEwen J, McGuire A, Muzny D, Myers RM, Nickerson DA, Ou J, Parsons DW, Petersen GM, Plon SE, Rehm HL, Roberts JS, Robinson D, Salama JS, Scollon S, Sharp RR, Shirts B, Spinner NB, Tabor HK, Tarczy-Hornoch P, Veenstra DL, Wagle N, Weck K, Wilfond BS, Wilhelmsen K, Wolf SM, Wynn J, Yu JH; CSER Consortium. (2016). Am J Hum Genet. https://doi.org/10.1016/j.ajhg.2016.06.002. PMID: 27392080.

Clinical Sequencing Exploratory Research Consortium: Accelerating Evidence-Based Practice of Genomic Medicine

Green RC, Goddard KAB, Jarvik GP, Amendola LM, Appelbaum PS, Berg JS, Bernhardt BA, Biesecker LG, Biswas S, Blout CL, Bowling KM, Brothers KB, Burke W, Caga-Anan CF, Chinnaiyan AM, Chung WK, Clayton EW, Cooper GM, East K, Evans JP, Fullerton SM, Garraway LA, Garrett JR, Gray SW, Henderson GE, Hindorff LA, Holm IA, Lewis MH, Hutter CM, Janne PA, Joffe S, Kaufman D, Knoppers BM, Koenig BA, Krantz ID, Manolio TA, McCullough L, McEwen J, McGuire A, Muzny D, Myers RM, Nickerson DA, Ou J, Parsons DW, Petersen GM, Plon SE, Rehm HL, Roberts JS, Robinson D, Salama JS, Scollon S, Sharp RR, Shirts B, Spinner NB, Tabor HK, Tarczy-Hornoch P, Veenstra DL, Wagle N, Weck K, Wilfond BS, Wilhelmsen K, Wolf SM, Wynn J, Yu JH; CSER Consortium. (2016). Am J Hum Genet. https://doi.org/10.1016/j.ajhg.2016.04.011. PMID: 27181682.

De novo FGF12 mutation in 2 patients with neonatal-onset epilepsy

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Assessing the reproducibility of exome copy number variations predictions

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A standardized, evidence-based protocol to assess clinical actionability of genetic disorders associated with genomic variation

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Consideration of Cosegregation in the Pathogenicity Classification of Genomic Variants

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Generating a taxonomy for genetic conditions relevant to reproductive planning

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Reclassification of genetic-based risk predictions as GWAS data accumulate

Krier J, Barfield R, Green RC, Kraft P. (2016). Genome Med. https://doi.org/10.1186/s13073-016-0272-5. PMID: 26884246.

Incorporating a Genetic Risk Score Into Coronary Heart Disease Risk Estimates: Effect on Low-Density Lipoprotein Cholesterol Levels (the MI-GENES Clinical Trial)

Kullo IJ, Jouni H, Austin EE, Brown SA, Kruisselbrink TM, Isseh IN, Haddad RA, Marroush TS, Shameer K, Olson JE, Broeckel U, Green RC, Schaid DJ, Montori VM, Bailey KR. (2016). Circulation. https://doi.org/10.1161/CIRCULATIONAHA.115.020109. PMID: 26915630.

Comprehensive red blood cell and platelet antigen prediction from whole genome sequencing: proof of principle

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Patients' ratings of genetic conditions validate a taxonomy to simplify decisions about preconception carrier screening via genome sequencing

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Understanding self-management behaviors in symptomatic adults with uncertain etiology using an illness perceptions framework

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Participant use and communication of findings from exome sequencing: a mixed-methods study

Lewis KL, Hooker GW, Connors PD, Hyams TC, Wright MF, Caldwell S, Biesecker LG, Biesecker BB. (2016). Genet Med. https://doi.org/10.1038/gim.2015.133. PMID: 26540156.

Integrated tumor and germline whole-exome sequencing identifies mutations in MAPK and PI3K pathway genes in an adolescent with rosette-forming glioneuronal tumor of the fourth ventricle

Lin FY, Bergstrom K, Person R, Bavle A, Ballester LY, Scollon S, Raesz-Martinez R, Jea A, Birchansky S, Wheeler DA, Berg SL, Chintagumpala MM, Adesina AM, Eng C, Roy A, Plon SE, Parsons DW. (2016). Cold Spring Harb Mol Case Stud. https://doi.org/10.1101/mcs.a001057. PMID: 27626068.

Personal Genome Sequencing in Ostensibly Healthy Individuals and the PeopleSeq Consortium

Linderman MD, Nielsen DE, Green RC. (2016). J Pers Med. https://doi.org/10.3390/jpm6020014. PMID: 27023617.

Patients' perceived utility of whole-genome sequencing for their healthcare: findings from the MedSeq project

Lupo PJ, Robinson JO, Diamond PM, Jamal L, Danysh HE, Blumenthal-Barby J, Lehmann LS, Vassy JL, Christensen KD, Green RC, McGuire AL; MedSeq Project team. (2016). Per Med. https://doi.org/10.2217/pme.15.45. PMID: 27019659.

Elevated basal serum tryptase identifies a multisystem disorder associated with increased TPSAB1 copy number

Lyons JJ, Yu X, Hughes JD, Le QT, Jamil A, Bai Y, Ho N, Zhao M, Liu Y, O'Connell MP, Trivedi NN, Nelson C, DiMaggio T, Jones N, Matthews H, Lewis KL, Oler AJ, Carlson RJ, Arkwright PD, Hong C, Agama S, Wilson TM, Tucker S, Zhang Y, McElwee JJ, Pao M, Glover SC, Rothenberg ME, Hohman RJ, Stone KD, Caughey GH, Heller T, Metcalfe DD, Biesecker LG, Schwartz LB, Milner JD. (2016). Nat Genet. https://doi.org/10.1038/ng.3696. PMID: 27749843.

The Future of Genetics and Genomics: Closing the Phenotype Gap in Precision Medicine

MacRae CA, Vasan RS. (2016). Circulation. https://doi.org/10.1161/CIRCULATIONAHA.116.022547. PMID: 27324359.

What are people willing to pay for whole-genome sequencing information, and who decides what they receive?

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Modeling the costs of clinical decision support for genomic precision medicine

Mathias PC, Tarczy-Hornoch P, Shirts BH. (2016). AMIA Jt Summits Transl Sci Proc. https://doi.org/. PMID: 27570652.

Is Whole-Exome Sequencing an Ethically Disruptive Technology? Perspectives of Pediatric Oncologists and Parents of Pediatric Patients With Solid Tumors

McCullough LB, Slashinski MJ, McGuire AL, Street RL Jr, Eng CM, Gibbs RA, Parsons DW, Plon SE. (2016). Pediatr Blood Cancer. https://doi.org/10.1002/pbc.25815. PMID: 26505993.

Biallelic Alteration and Dysregulation of the Hippo Pathway in Mucinous Tubular and Spindle Cell Carcinoma of the Kidney

Mehra R, Vats P, Cieslik M, Cao X, Su F, Shukla S, Udager AM, Wang R, Pan J, Kasaian K, Lonigro R, Siddiqui J, Premkumar K, Palapattu G, Weizer A, Hafez KS, Wolf JS Jr, Sangoi AR, Trpkov K, Osunkoya AO, Zhou M, Giannico G, McKenney JK, Dhanasekaran SM, Chinnaiyan AM. (2016). Cancer Discov. https://doi.org/10.1158/2159-8290.CD-16-0267. PMID: 27604489.

Germline and somatic mutations in the MTOR gene in focal cortical dysplasia and epilepsy

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ALG1-CDG: Clinical and Molecular Characterization of 39 Unreported Patients

Ng BG, Shiryaev SA, Rymen D, Eklund EA, Raymond K, Kircher M, Abdenur JE, Alehan F, Midro AT, Bamshad MJ, Barone R, Berry GT, Brumbaugh JE, Buckingham KJ, Clarkson K, Cole FS, O'Connor S, Cooper GM, Van Coster R, Demmer LA, Diogo L, Fay AJ, Ficicioglu C, Fiumara A, Gahl WA, Ganetzky R, Goel H, Harshman LA, He M, Jaeken J, James PM, Katz D, Keldermans L, Kibaek M, Kornberg AJ, Lachlan K, Lam C, Yaplito-Lee J, Nickerson DA, Peters HL, Race V, Régal L, Rush JS, Rutledge SL, Shendure J, Souche E, Sparks SE, Trapane P, Sanchez-Valle A, Vilain E, Vøllo A, Waechter CJ, Wang RY, Wolfe LA, Wong DA, Wood T, Yang AC; University of Washington Center for Mendelian Genomics; Matthijs G, Freeze HH. (2016). Hum Mutat. https://doi.org/10.1002/humu.22983. PMID: 26931382.

Physician perspectives of CYP2C19 and clopidogrel drug-gene interaction active clinical decision support alerts

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Diagnostic Yield of Clinical Tumor and Germline Whole-Exome Sequencing for Children With Solid Tumors

Parsons DW, Roy A, Yang Y, Wang T, Scollon S, Bergstrom K, Kerstein RA, Gutierrez S, Petersen AK, Bavle A, Lin FY, López-Terrada DH, Monzon FA, Hicks MJ, Eldin KW, Quintanilla NM, Adesina AM, Mohila CA, Whitehead W, Jea A, Vasudevan SA, Nuchtern JG, Ramamurthy U, McGuire AL, Hilsenbeck SG, Reid JG, Muzny DM, Wheeler DA, Berg SL, Chintagumpala MM, Eng CM, Gibbs RA, Plon SE. (2016). JAMA Oncol. https://doi.org/10.1001/jamaoncol.2015.5699. PMID: 26822237.

A genotypic ascertainment approach to refute the association of MYO1A variants with non-syndromic deafness

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Genomics is failing on diversity

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Practical considerations for implementing genomic information resources. Experiences from eMERGE and CSER

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The Changing Landscape of Molecular Diagnostic Testing: Implications for Academic Medical Centers

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Allocation of Resources to Communication of Research Result Summaries

Richards JE, Bane E, Fullerton SM, Ludman EJ, Jarvik G. (2016). J Empir Res Hum Res Ethics. https://doi.org/10.1177/1556264616667126. PMID: 27613778.

Somatic cancer variant curation and harmonization through consensus minimum variant level data

Ritter DI, Roychowdhury S, Roy A, Rao S, Landrum MJ, Sonkin D, Shekar M, Davis CF, Hart RK, Micheel C, Weaver M, Van Allen EM, Parsons DW, McLeod HL, Watson MS, Plon SE, Kulkarni S, Madhavan S; ClinGen Somatic Cancer Working Group. (2016). Genome Med. https://doi.org/10.1186/s13073-016-0367-z. PMID: 27814769.

Disclosing genetic risk for coronary heart disease: effects on perceived personal control and genetic counseling satisfaction

Robinson CL, Jouni H, Kruisselbrink TM, Austin EE, Christensen KD, Green RC, Kullo IJ. (2016). Clin Genet. https://doi.org/10.1111/cge.12577. PMID: 25708169.

Participants and Study Decliners' Perspectives About the Risks of Participating in a Clinical Trial of Whole Genome Sequencing

Robinson JO, Carroll TM, Feuerman LZ, Perry DL, Hoffman-Andrews L, Walsh RC, Christensen KD, Green RC, McGuire AL; MedSeq Project Team. (2016). J Empir Res Hum Res Ethics. https://doi.org/10.1177/1556264615624078. PMID: 26928896.

Translating cancer genomes and transcriptomes for precision oncology

Roychowdhury S, Chinnaiyan AM. (2016). CA Cancer J Clin. https://doi.org/10.3322/caac.21329. PMID: 26528881.

Raising Genomic Citizens: Adolescents and the Return of Secondary Genomic Findings

Sabatello M, Appelbaum PS. (2016). J Law Med Ethics. https://doi.org/10.1177/1073110516654123. PMID: 27338605.

Stakeholder perspectives on implementing a universal Lynch syndrome screening program: a qualitative study of early barriers and facilitators

Schneider JL, Davis J, Kauffman TL, Reiss JA, McGinley C, Arnold K, Zepp J, Gilmore M, Muessig KR, Syngal S, Acheson L, Wiesner GL, Peterson SK, Goddard KA. (2016). Genet Med. https://doi.org/10.1038/gim.2015.43. PMID: 25880440.

"Is It Worth Knowing?" Focus Group Participants' Perceived Utility of Genomic Preconception Carrier Screening

Schneider JL, Goddard KA, Davis J, Wilfond B, Kauffman TL, Reiss JA, Gilmore M, Himes P, Lynch FL, Leo MC, McMullen C. (2016). J Genet Couns. https://doi.org/10.1007/s10897-015-9851-7. PMID: 26093606.

Germline Analysis from Tumor-Germline Sequencing Dyads to Identify Clinically Actionable Secondary Findings

Seifert BA, O'Daniel JM, Amin K, Marchuk DS, Patel NM, Parker JS, Hoyle AP, Mose LE, Marron A, Hayward MC, Bizon C, Wilhelmsen KC, Evans JP, Earp HS 3rd, Sharpless NE, Hayes DN, Berg JS. (2016). Clin Cancer Res. https://doi.org/10.1158/1078-0432.CCR-16-0015. PMID: 27083775.

Defining the Clinical Value of a Genomic Diagnosis in the Era of Next-Generation Sequencing

Strande NT, Berg JS. (2016). Annu Rev Genomics Hum Genet. https://doi.org/10.1146/annurev-genom-083115-022348. PMID: 27362341.

"Not Tied Up Neatly with a Bow": Professionals' Challenging Cases in Informed Consent for Genomic Sequencing

Tomlinson AN, Skinner D, Perry DL, Scollon SR, Roche MI, Bernhardt BA. (2016). J Genet Couns. https://doi.org/10.1007/s10897-015-9842-8. PMID: 25911622.

Bioinformatics Workflow for Clinical Whole Genome Sequencing at Partners HealthCare Personalized Medicine

Tsai EA, Shakbatyan R, Evans J, Rossetti P, Graham C, Sharma H, Lin CF, Lebo MS. (2016). J Pers Med. https://doi.org/10.3390/jpm6010012. PMID: 26927186.

Appropriateness: A Key to Enabling the Use of Genomics in Clinical Practice?

Vassy JL, Bates DW, Murray MF. (2016). Am J Med. https://doi.org/10.1016/j.amjmed.2016.02.010. PMID: 26965302.

Psychosocial Factors Influencing Parental Interest in Genomic Sequencing of Newborns

Waisbren SE, Weipert CM, Walsh RC, Petty CR, Green RC. (2016). Pediatrics. https://doi.org/10.1542/peds.2015-3731G. PMID: 26729701.

A randomized trial Examining The Impact Of Communicating Genetic And Lifestyle Risks For Obesity

Wang C, Gordon ES, Norkunas T, Wawak L, Liu CT, Winter M, Kasper RS, Christman MF, Green RC, Bowen DJ. (2016). Obesity (Silver Spring). https://doi.org/10.1002/oby.21661. PMID: 27891830.

High incidence of unrecognized visceral/neurological late-onset Niemann-Pick disease, type C1, predicted by analysis of massively parallel sequencing data sets

Wassif CA, Cross JL, Iben J, Sanchez-Pulido L, Cougnoux A, Platt FM, Ory DS, Ponting CP, Bailey-Wilson JE, Biesecker LG, Porter FD. (2016). Genet Med. https://doi.org/10.1038/gim.2015.25. PMID: 25764212.

Genomic Testing: a Genetic Counselor's Personal Reflection on Three Years of Consenting and Testing

Wynn J. (2016). J Genet Couns. https://doi.org/10.1007/s10897-015-9868-y. PMID: 26242468.

Look before you leap: genomic screening in obstetrics and gynecology

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Germline Findings in Tumor-Only Sequencing: Points to Consider for Clinicians and Laboratories

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Looking for Trouble and Finding It

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A one-page summary report of genome sequencing for the healthy adult

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Disclosing Secondary Findings from Pediatric Sequencing to Families: Considering the "Benefit to Families"

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It's complicated: criteria for policy decisions for the clinical integration of genome-scale sequencing for reproductive decision making

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Returning a Research Participant's Genomic Results to Relatives: Analysis and Recommendations

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Mapping the Ethics of Translational Genomics: Situating Return of Results and Navigating the Research-Clinical Divide

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INTRODUCTION: Return of Research Results: What About the Family?

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Association of Researcher Characteristics with Views on Return of Incidental Findings from Genomic Research

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Hepatocellular carcinoma associated with tight-junction protein 2 deficiency

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Biobank participants' preferences for disclosure of genetic research results: perspectives from the OurGenes, OurHealth, OurCommunity project

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Models of consent to return of incidental findings in genomic research

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Informed consent for return of incidental findings in genomic research

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Genetic testing in cardiovascular diseases

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Genetic counselors and the future of clinical genomics

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Diagnostic clinical genome and exome sequencing

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Why information alone is not enough: behavioral economics and the future of genomic medicine

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Parental permission for pilot newborn screening research: guidelines from the NBSTRN

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Practical guidance on informed consent for pediatric participants in a biorepository

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An international effort towards developing standards for best practices in analysis, interpretation and reporting of clinical genome sequencing results in the CLARITY Challenge

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Return of results: ethical and legal distinctions between research and clinical care

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Design, methods, and participant characteristics of the Impact of Personal Genomics (PGen) Study, a prospective cohort study of direct-to-consumer personal genomic testing customers

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Addressing the ethical challenges in genetic testing and sequencing of children

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Refining the structure and content of clinical genomic reports

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A framework for analyzing the ethics of disclosing genetic research findings

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Biobanks containing clinical specimens: defining characteristics, policies, and practices

Edwards T, Cadigan RJ, Evans JP, Henderson GE. (2014). Clin Biochem. https://doi.org/10.1016/j.clinbiochem.2013.11.023. PMID: 24345347.

Regulatory changes raise troubling questions for genomic testing

Evans BJ, Dorschner MO, Burke W, Jarvik GP. (2014). Genet Med. https://doi.org/10.1038/gim.2014.127. PMID: 25255365.

Economic regulation of next-generation sequencing

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Mining the human genome after Association for Molecular Pathology v. Myriad Genetics

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The First Amendment Right to Speak About the Human Genome

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Traditional roles in a non-traditional setting: genetic counseling in precision oncology

Everett JN, Gustafson SL, Raymond VM. (2014). J Genet Couns. https://doi.org/10.1007/s10897-014-9698-3. PMID: 24578120.

A genetic counselor's guide to using next-generation sequencing in clinical practice

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GCH1 heterozygous mutation identified by whole-exome sequencing as a treatable condition in a patient presenting with progressive spastic paraplegia

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Comparative effectiveness of next generation genomic sequencing for disease diagnosis: design of a randomized controlled trial in patients with colorectal cancer/polyposis syndromes

Gallego CJ, Bennette CS, Heagerty P, Comstock B, Horike-Pyne M, Hisama F, Amendola LM, Bennett RL, Dorschner MO, Tarczy-Hornoch P, Grady WM, Fullerton SM, Trinidad SB, Regier DA, Nickerson DA, Burke W, Patrick DL, Jarvik GP, Veenstra DL. (2014). Contemp Clin Trials. https://doi.org/10.1016/j.cct.2014.06.016. PMID: 24997220.

Integrated next-generation sequencing and avatar mouse models for personalized cancer treatment

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Molecular alterations and biomarkers in colorectal cancer

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Physicians' attitudes about multiplex tumor genomic testing

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Social and behavioral research in genomic sequencing: approaches from the Clinical Sequencing Exploratory Research Consortium Outcomes and Measures Working Group

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Genetic testing of children for diseases that have onset in adulthood: the limits of family interests

Hardart GE, Chung WK. (2014). Pediatrics. https://doi.org/10.1542/peds.2014-1394F. PMID: 25274875.

The challenge of informed consent and return of results in translational genomics: empirical analysis and recommendations

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Susceptibility to type 2 diabetes mellitus--from genes to prevention

Hivert MF, Vassy JL, Meigs JB. (2014). Nat Rev Endocrinol. https://doi.org/10.1038/nrendo.2014.11. PMID: 24535206.

Guidelines for return of research results from pediatric genomic studies: deliberations of the Boston Children's Hospital Gene Partnership Informed Cohort Oversight Board

Holm IA, Savage SK, Green RC, Juengst E, McGuire A, Kornetsky S, Brewster SJ, Joffe S, Taylor P. (2014). Genet Med. https://doi.org/10.1038/gim.2013.190. PMID: 24406460.

Clinical Management of Pediatric Genomic Testing

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Reducing false-positive incidental findings with ensemble genotyping and logistic regression based variant filtering methods

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Return of genomic results to research participants: the floor, the ceiling, and the choices in between

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Processes and factors involved in decisions regarding return of incidental genomic findings in research

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Managing Expectational Language: Translational genetic professionals consider the clinical potential of next-generation sequencing technologies

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Returning pleiotropic results from genetic testing to patients and research participants

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Have we asked too much of consent?

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Prioritizing disease-linked variants, genes, and pathways with an interactive whole-genome analysis pipeline

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Stakeholders' opinions on the implementation of pediatric whole exome sequencing: implications for informed consent

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Newborn screening controversy: past, present, and future

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Guidelines for investigating causality of sequence variants in human disease

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Clinically relevant functional annotation of genotype

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Clinical phenotype-based gene prioritization: an initial study using semantic similarity and the human phenotype ontology

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Can I be sued for that? Liability risk and the disclosure of clinically significant genetic research findings

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A systematic approach to the reporting of medically relevant findings from whole genome sequencing

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Educating physicians in the era of genomic medicine

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Pragmatic and Ethical Challenges of Incorporating the Genome into the Electronic Medical Record

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A Template for Authoring and Adapting Genomic Medicine Content in the eMERGE Infobutton Project

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Clinical tumor sequencing: an incidental casualty of the American College of Medical Genetics and Genomics recommendations for reporting of incidental findings

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Variants in PPP3R1 and MAPT are associated with more rapid functional decline in Alzheimer's disease: the Cache County Dementia Progression Study

Peterson D, Munger C, Crowley J, Corcoran C, Cruchaga C, Goate AM, Norton MC, Green RC, Munger RG, Breitner JC, Welsh-Bohmer KA, Lyketsos C, Tschanz J, Kauwe JS; Alzheimer's Disease Neuroimaging Initiative. (2014). Alzheimers Dement. https://doi.org/10.1016/j.jalz.2013.02.010. PMID: 23727081.

Muscle dysfunction in hypertrophic cardiomyopathy: what is needed to move to translation?

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Genetic information, non-discrimination, and privacy protections in genetic counseling practice

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Do physicians think genomic medicine will be useful for patient care?

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Obtaining informed consent for clinical tumor and germline exome sequencing of newly diagnosed childhood cancer patients

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Large numbers of individuals are required to classify and define risk for rare variants in known cancer risk genes

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Personalized Risk Estimator for Rheumatoid Arthritis (PRE-RA) Family Study: rationale and design for a randomized controlled trial evaluating rheumatoid arthritis risk education to first-degree relatives

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Utility before business

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Searching for a Rosetta Stone: genetic data and clinical patient management

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Somatic ERCC2 mutations correlate with cisplatin sensitivity in muscle-invasive urothelial carcinoma

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Whole-exome sequencing and clinical interpretation of formalin-fixed, paraffin-embedded tumor samples to guide precision cancer medicine

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Polygenic type 2 diabetes prediction at the limit of common variant detection

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The MedSeq Project: a randomized trial of integrating whole genome sequencing into clinical medicine

Vassy JL, Lautenbach DM, McLaughlin HM, Kong SW, Christensen KD, Krier J, Kohane IS, Feuerman LZ, Blumenthal-Barby J, Roberts JS, Lehmann LS, Ho CY, Ubel PA, MacRae CA, Seidman CE, Murray MF, McGuire AL, Rehm HL, Green RC; MedSeq Project. (2014). Trials. https://doi.org/10.1186/1745-6215-15-85. PMID: 24645908.

"Use it or lose it" as an alternative approach to protect genetic privacy in personalized medicine

Wagner JK, Mozersky JT, Pyeritz RE. (2014). Urol Oncol. https://doi.org/10.1016/j.urolonc.2013.09.016. PMID: 24445287.

Metabolite traits and genetic risk provide complementary information for the prediction of future type 2 diabetes

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A randomized trial of the clinical utility of genetic testing for obesity: design and implementation considerations

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De novo truncating mutations in AHDC1 in individuals with syndromic expressive language delay, hypotonia, and sleep apnea

Xia F, Bainbridge MN, Tan TY, Wangler MF, Scheuerle AE, Zackai EH, Harr MH, Sutton VR, Nalam RL, Zhu W, Nash M, Ryan MM, Yaplito-Lee J, Hunter JV, Deardorff MA, Penney SJ, Beaudet AL, Plon SE, Boerwinkle EA, Lupski JR, Eng CM, Muzny DM, Yang Y, Gibbs RA. (2014). Am J Hum Genet. https://doi.org/10.1016/j.ajhg.2014.04.006. PMID: 24791903.

Molecular findings among patients referred for clinical whole-exome sequencing

Yang Y, Muzny DM, Xia F, Niu Z, Person R, Ding Y, Ward P, Braxton A, Wang M, Buhay C, Veeraraghavan N, Hawes A, Chiang T, Leduc M, Beuten J, Zhang J, He W, Scull J, Willis A, Landsverk M, Craigen WJ, Bekheirnia MR, Stray-Pedersen A, Liu P, Wen S, Alcaraz W, Cui H, Walkiewicz M, Reid J, Bainbridge M, Patel A, Boerwinkle E, Beaudet AL, Lupski JR, Plon SE, Gibbs RA, Eng CM. (2014). JAMA. https://doi.org/10.1001/jama.2014.14601. PMID: 25326635.

Attitudes of genetics professionals toward the return of incidental results from exome and whole-genome sequencing

Yu JH, Harrell TM, Jamal SM, Tabor HK, Bamshad MJ. (2014). Am J Hum Genet. https://doi.org/10.1016/j.ajhg.2014.06.004. PMID: 24975944.

The best interests of the child and the return of results in genetic research: international comparative perspectives

Zawati MH, Parry D, Knoppers BM. (2014). BMC Med Ethics. https://doi.org/10.1186/1472-6939-15-72. PMID: 25280986.

Parents' preferences for return of results in pediatric genomic research

Ziniel SI, Savage SK, Huntington N, Amatruda J, Green RC, Weitzman ER, Taylor P, Holm IA. (2014). Public Health Genomics. https://doi.org/10.1159/000358539. PMID: 24642506.

Direct-to-consumer genomic testing offers little clinical utility but appears to cause minimal harm

Adams SD, Evans JP, Aylsworth AS. (2013). N C Med J. https://doi.org/. PMID: 24316774.

Return of incidental findings in genomic medicine: measuring what patients value--development of an instrument to measure preferences for information from next-generation testing (IMPRINT)

Bennette CS, Trinidad SB, Fullerton SM, Patrick D, Amendola L, Burke W, Hisama FM, Jarvik GP, Regier DA, Veenstra DL. (2013). Genet Med. https://doi.org/10.1038/gim.2013.63. PMID: 23722871.

Processes and preliminary outputs for identification of actionable genes as incidental findings in genomic sequence data in the Clinical Sequencing Exploratory Research Consortium

Berg JS, Amendola LM, Eng C, Van Allen E, Gray SW, Wagle N, Rehm HL, DeChene ET, Dulik MC, Hisama FM, Burke W, Spinner NB, Garraway L, Green RC, Plon S, Evans JP, Jarvik GP; Members of the CSER Actionability and Return of Results Working Group. (2013). Genet Med. https://doi.org/10.1038/gim.2013.133. PMID: 24195999.

Retention and research use of residual newborn screening bloodspots

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