AnVIL hosts data from the following programs and also allows users to submit their own data to the platform.
GTExThe Genotype-Tissue Expression (GTEx) project is an ongoing effort to build a comprehensive public resource to study tissue-specific gene expression and regulation. Samples were collected from 54 non-diseased tissue sites across nearly 1000 individuals, primarily for molecular assays including WGS, WES, and RNA-Seq.Active August, 2020 to July, 2023
CSERThe Clinical Sequencing Evidence-Generating Research (CSER) consortium is a national multi-site research program funded by the National Human Genome Research Institute (NHGRI), the National Cancer Institute (NCI), and the National Institute on Minority Health and Health Disparities (NIMHD).Active August, 2020 to July, 2023
eMERGEThe Electronic and MEdical Records and Genomics project (eMERGE) is a national network organized and funded by the NHGRI that combines DNA biorepositories with electronic medical record (EMR) systems for large scale, high-throughput genetic research in support of implementing genomic medicine.Active August, 2020 to July, 2023
HPRCThe Human Pangenome Reference Consortium aims to modernize the human reference to include a collection of diverse and highly accurate, haplotype-phased genome assemblies. This initiative will generate new technical standards in genome sequencing, scalable and reproducible assembly methods, and pangenomic tool development to ensure comprehensive variant discovery.Active August, 2020 to July, 2023
The following consortia are planned for data ingestion. Additional consortia are under consideration and will be listed as they are approved.