NHGRI Analysis Visualization and Informatics Lab-space



NHLBI TOPMed - NHGRI CCDG: UCSF Atrial Fibrillation Study

CCDGphs001933.v1.p1dbGapdbGap FHIR


The University of California San Francisco (UCSF) Cardiovascular Research Institute (CVRI) Resource in Arteriosclerosis and Metabolic Disease is an ongoing multi-ethnic study of adults ≥ 18 years of age which was started in 1989 and now includes 28,000 participants recruited from the UCSF medical system. Within the Resource lies data and biospecimens from nearly 1,000 patients presenting to the electrophysiology laboratory for electrophysiology procedures that were densely phenotyped for electrophysiologic characteristics with biospecimens collected from various intra and extra-cardiac chambers. Phenotyping of all participants was achieved via interview and review of medical records. A subset of 113 participants with early-onset atrial fibrillation underwent WGS as a part of the TOPMed Program.


2.96 TBSize


Consent CodesTBD, Consortia Access Only
Diseasesatrial fibrillation
AccessControlled Access, Consortium Access Only
Study DesignCase-Control, TBD, Case Set
Data TypesGenotyping Array, Exome, Whole Genome

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Terra Workspaces

This study has been divided into the following workspaces by consent codes and optionally the originating laboratory.

Terra Workspace NameConsent CodeDiseaseAccessStudy DesignData TypeSamplesParticipantsSize (TB)
AnVIL_CCDG_Broad_CVD_AF_Marcus_UCSF_ArraysTBDatrial fibrillationCase-ControlGenotyping Array1561560.03
AnVIL_CCDG_Broad_CVD_AF_Marcus_UCSF_WESTBDatrial fibrillationTBDExome5995990.53
AnVIL_CCDG_Broad_CVD_AFib_UCSF_WGSConsortia Access Onlyatrial fibrillationCase SetWhole Genome1121122.41